7 homologs were found in PanDaTox collection
for query gene Lcho_1820 on replicon NC_010524
Organism: Leptothrix cholodnii SP-6



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010524  Lcho_1820  hypothetical protein  100 
 
 		 100 aa  203  7e-52  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00303252 
 
 
-
 
NC_008825  Mpe_A2578  hypothetical protein  55 
 
 		 100 aa  107  6e-23  Methylibium petroleiphilum PM1  Bacteria  normal  0.0240366  normal  1 
 
 
-
 
NC_007908  Rfer_2847  hypothetical protein  50 
 
 		 99 aa  90.5  7e-18  Rhodoferax ferrireducens T118  Bacteria  normal  0.5167  n/a   
 
 
-
 
NC_008781  Pnap_0052  hypothetical protein  44 
 
 		 99 aa  85.5  2e-16  Polaromonas naphthalenivorans CJ2  Bacteria  normal  1  normal  0.093428 
 
 
-
 
NC_011992  Dtpsy_3296  hypothetical protein  37.76 
 
 		 99 aa  73.6  0.0000000000009  Acidovorax ebreus TPSY  Bacteria  normal  1  n/a   
 
 
-
 
NC_008782  Ajs_3947  hypothetical protein  37.65 
 
 		 88 aa  64.7  0.0000000004  Acidovorax sp. JS42  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008340  Mlg_1294  hypothetical protein  28.42 
 
 		 101 aa  44.7  0.0004  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.979085  normal  1 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>