Gene Lcho_1820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_1820 
Symbol 
ID6163854 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp1967234 
End bp1967536 
Gene Length303 bp 
Protein Length100 aa 
Translation table11 
GC content72% 
IMG OID641664582 
Producthypothetical protein 
Protein accessionYP_001790852 
Protein GI171058503 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.00303252 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAGAGCG GCTACCCCGC CAGCTTCACC CGCGAACAGG GTTTCAGCGA GGCCGACTGG 
CTGTCGTGCC TGCCGGGCGC GGTGCGGGGT CGTCCTTGGC GCCGCCCGCG CGACGGCCGG
GCGGAGGTCG ACATCGACGA CGGCCGCCTG CATCTGGCGT GGCAGCCGCT GGCGCCGCGC
CAGATCGCGC TGATCCGCAT CCCGCGGATG GCGGTGAGCT ACCGCTTCGA GGGCGTCGGC
GACGATGCCC GCGAGGCCTT CATGAAGTAT TTCGACCTGT TCATGCAGCG CGGCGGCGGC
TGA
 
Protein sequence
MQSGYPASFT REQGFSEADW LSCLPGAVRG RPWRRPRDGR AEVDIDDGRL HLAWQPLAPR 
QIALIRIPRM AVSYRFEGVG DDAREAFMKY FDLFMQRGGG