11 homologs were found in PanDaTox collection
for query gene Lcho_1061 on replicon NC_010524
Organism: Leptothrix cholodnii SP-6



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010524  Lcho_1061  hypothetical protein  100 
 
 		 111 aa  223  6e-58  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  1 
 
 
-
 
NC_008781  Pnap_1477  hypothetical protein  45.16 
 
 		 132 aa  68.6  0.00000000003  Polaromonas naphthalenivorans CJ2  Bacteria  normal  1  normal  0.305318 
 
 
-
 
NC_010002  Daci_5326  hypothetical protein  42.86 
 
 		 123 aa  68.6  0.00000000003  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008825  Mpe_A1147  hypothetical protein  47.22 
 
 		 136 aa  67.8  0.00000000005  Methylibium petroleiphilum PM1  Bacteria  normal  0.249282  normal  0.413568 
 
 
-
 
NC_007908  Rfer_1324  hypothetical protein  37.27 
 
 		 98 aa  64.3  0.0000000005  Rhodoferax ferrireducens T118  Bacteria  normal  0.924694  n/a   
 
 
-
 
NC_008752  Aave_1929  hypothetical protein  42.98 
 
 		 122 aa  64.3  0.0000000005  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0504426  normal  0.0156708 
 
 
-
 
NC_008786  Veis_1842  hypothetical protein  42.86 
 
 		 107 aa  58.5  0.00000003  Verminephrobacter eiseniae EF01-2  Bacteria  normal  1  normal  0.541159 
 
 
-
 
NC_007948  Bpro_1728  hypothetical protein  47.22 
 
 		 157 aa  58.2  0.00000004  Polaromonas sp. JS666  Bacteria  normal  1  normal  0.732087 
 
 
-
 
NC_011992  Dtpsy_2671  hypothetical protein  38.27 
 
 		 122 aa  57  0.00000008  Acidovorax ebreus TPSY  Bacteria  normal  0.374434  n/a   
 
 
-
 
NC_008782  Ajs_3319  hypothetical protein  38.27 
 
 		 122 aa  57  0.00000009  Acidovorax sp. JS42  Bacteria  normal  0.449477  normal  0.0528338 
 
 
-
 
NC_012791  Vapar_1541  hypothetical protein  36.71 
 
 		 121 aa  54.7  0.0000004  Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>