Gene Vapar_1541 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_1541 
Symbol 
ID7973141 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp1664522 
End bp1664887 
Gene Length366 bp 
Protein Length121 aa 
Translation table11 
GC content69% 
IMG OID644792141 
Producthypothetical protein 
Protein accessionYP_002943458 
Protein GI239814548 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTAGCC CCACACTCCT GGTCGCCCGC CGCATCCTGC TGGCGCTGGC CTTTGCCGCC 
CCCATTGCCG CCGTCCAGGC GCAGCCCGCG CCCGCCGCAA CGCCCGCGCC GGCCGAGCCG
CTACAAAATC AGGAGCAGGC CGAGGGCCGC CGCAACCAGA AGGTCGAGCA CATCCACACG
GAAGACAGCG GAGCCTCGGT CGACGAGGTG CGCTATGGCG GCCGCACGCA GAGCATCAAC
GTGAAGCCCA AGGCCAATGT GCCGGGCTAC GAGGTGCGGC CCAACGATCC AGGCGCGCGT
GCGGGTTCCG GCGATGCCAA CTCGAACGGC AATGGCGCCC GGGTCTGGAA CGTGATGAAG
TTCTGA
 
Protein sequence
MPSPTLLVAR RILLALAFAA PIAAVQAQPA PAATPAPAEP LQNQEQAEGR RNQKVEHIHT 
EDSGASVDEV RYGGRTQSIN VKPKANVPGY EVRPNDPGAR AGSGDANSNG NGARVWNVMK
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