7 homologs were found in PanDaTox collection
for query gene LACR_C20 on replicon NC_008505
Organism: Lactococcus lactis subsp. cremoris SK11



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008505  LACR_C20  relaxase/mobilization nuclease domain-containing protein  100 
 
 
135 aa  281  3.0000000000000004e-75  Lactococcus lactis subsp. cremoris SK11  Bacteria  n/a    n/a   
 
 
-
 
NC_004116  SAG1250  Tn5252, relaxase  30.4 
 
 
621 aa  72.8  0.000000000002  Streptococcus agalactiae 2603V/R  Bacteria  normal  n/a   
 
 
-
 
NC_013515  Smon_0665  relaxase  37.04 
 
 
123 aa  66.6  0.0000000001  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_009012  Cthe_3237  relaxase/mobilization nuclease domain-containing protein  29.77 
 
 
463 aa  63.2  0.000000001  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_013164  Apre_1758  Relaxase/mobilization nuclease family protein  36.11 
 
 
443 aa  60.8  0.000000007  Anaerococcus prevotii DSM 20548  Bacteria  normal  0.562908  n/a   
 
 
-
 
NC_007105  pE33L54_0050  relaxase  30.43 
 
 
443 aa  52.4  0.000002  Bacillus cereus E33L  Bacteria  normal  0.699797  n/a   
 
 
-
 
NC_006663  SEA0029  rlx protein, putative  31.43 
 
 
338 aa  42.4  0.002  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>