Gene Cthe_3237 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_3237 
Symbol 
ID4810277 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp3841627 
End bp3843018 
Gene Length1392 bp 
Protein Length463 aa 
Translation table11 
GC content48% 
IMG OID640108671 
Productrelaxase/mobilization nuclease domain-containing protein 
Protein accessionYP_001039625 
Protein GI125975715 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGATTA TCTATGCAGT CCGGGAACGG ACACAGAGCA AGACCGCCAT GCGCAAGGTA 
ATGGACTATG TGGTCCAGGA CAAAAAGACT ATGTATGAAA ATGAGAACGG TCAAAGGTGC
AAGCTGGTGT CAGGGCAGAA CTGCTGCGGA GATACCGCTT TCAAAGAATT CATGACCACA
AAACGGCAGT ATCAAAAGGA AAAAGGCGTG TACTTTTATC AGTATATCCA GTCCTTCAAA
CCTGGAATAC ACGCCACACC GCAGGAAATT CATCAGATGG GCGTGGAGCT TGCAAAGTAT
TTCAAAGGCT ATGAAGTGCA AATCGCGACC CACATTGACC GTGATCACTG GCACAACCAC
CTTATAGTCA ATTCAGTAAG CTGTGAAACG GGCTTGAAAT TACAGTTTAA TGAAAAGAAT
TTAGAGCAGC TTCGCACCCT GTCGGATGAA ATTTGTGCGG TGCACGGGCT GGATACCTTA
AAGCCCTATC AGAAGCCAAA GCAAAAGCCC ATGGGTGCAG GTGAGTACCG TGCAGCGGTA
AGAGGAGGCA GCTATAAATT CAAGCTGATG AACGCCATCG ACCAGGCCAT GACACAGAGC
CGCACCCGGG AAGAATTTAT CGTCCGTATG GAGCAAATGG GCTACCAGGT GAAATGGAAC
CCGCACCATA AATATATCAC CTACACCACC CCGGAGGGGC AGCGGTGCAG GGACAATAAG
CTCCACGAAA CCAAGTATCT AAAAACTGAA ATGGAGGGAT ATTTCAGTGC CAAGCTTAGA
AGAATTGAAG CAGCGCAACA AGCCGGATAT ACCGGAGGGC ATCCCACCGG TACAACACCA
GCAGACCGTA GCAGTGCCCT ATCTGCCGCT GGTCAGCGCA ATACCCACCG ACCAATGGAA
CATGATGCTG GAGAGCCAGA CCGCAGCCAT ACAGCGGTTG CAGGAATTGA CGGTATACAT
ATCCACCCTG CCAACCGTAG ACGACGTAAA CAATATGATG AAGAATTACT TCCAGAACGT
TTACGACAGG CAGACGGATC ACCTGTCGAA TACCATACGG AAAGAGCATC AGCGGATTAT
GGAGAATATG ACTTCGAGTA TGGAGAAGAC GACGGATACG ATTGGATGGA AGCTGACGAA
TACACTGGAG CATTGGGAAG AAAAGCTCCG GCACCGGGAC ATGTCGCCCA TAAAAATGAA
AGCCAAATGG GCAGGCATCG GGGCATTGAC TTCGACGATA TTGTGGCTCT TGCTAAAGCT
GTTGACGACC TTGTAAATCC TTACAACCCC GAGGAAGAAC GGGAAAAGAA AAAGAAATAC
GTACCCAAAA GCGACCACAA AAAGCAGAAA AAGAAACAAC ACCATAACCA TGACTATGAG
TTAAGCCTGT AA
 
Protein sequence
MAIIYAVRER TQSKTAMRKV MDYVVQDKKT MYENENGQRC KLVSGQNCCG DTAFKEFMTT 
KRQYQKEKGV YFYQYIQSFK PGIHATPQEI HQMGVELAKY FKGYEVQIAT HIDRDHWHNH
LIVNSVSCET GLKLQFNEKN LEQLRTLSDE ICAVHGLDTL KPYQKPKQKP MGAGEYRAAV
RGGSYKFKLM NAIDQAMTQS RTREEFIVRM EQMGYQVKWN PHHKYITYTT PEGQRCRDNK
LHETKYLKTE MEGYFSAKLR RIEAAQQAGY TGGHPTGTTP ADRSSALSAA GQRNTHRPME
HDAGEPDRSH TAVAGIDGIH IHPANRRRRK QYDEELLPER LRQADGSPVE YHTERASADY
GEYDFEYGED DGYDWMEADE YTGALGRKAP APGHVAHKNE SQMGRHRGID FDDIVALAKA
VDDLVNPYNP EEEREKKKKY VPKSDHKKQK KKQHHNHDYE LSL