15 homologs were found in PanDaTox collection
for query gene LACR_0800 on replicon NC_008527
Organism: Lactococcus lactis subsp. cremoris SK11



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008527  LACR_0800  XRE family transcriptional regulator  100 
 
 
181 aa  364  1e-100  Lactococcus lactis subsp. cremoris SK11  Bacteria  hitchhiker  0.00107371  n/a   
 
 
-
 
NC_008527  LACR_1835  XRE family transcriptional regulator  38.69 
 
 
277 aa  106  2e-22  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  n/a   
 
 
-
 
NC_008527  LACR_1413  transcriptional regulator  36.69 
 
 
296 aa  95.9  3e-19  Lactococcus lactis subsp. cremoris SK11  Bacteria  decreased coverage  0.00403461  n/a   
 
 
-
 
NC_008527  LACR_2229  hypothetical protein  27.41 
 
 
353 aa  68.6  0.00000000004  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  0.234571  n/a   
 
 
-
 
NC_008528  OEOE_0195  XRE family transcriptional regulator  27.84 
 
 
289 aa  64.7  0.0000000008  Oenococcus oeni PSU-1  Bacteria  normal  n/a   
 
 
-
 
NC_004116  SAG1490  MutR family transcriptional regulator  23.08 
 
 
282 aa  56.6  0.0000002  Streptococcus agalactiae 2603V/R  Bacteria  decreased coverage  0.000229278  n/a   
 
 
-
 
NC_008532  STER_1358  XRE family transcriptional regulator  21.26 
 
 
286 aa  53.1  0.000002  Streptococcus thermophilus LMD-9  Bacteria  hitchhiker  0.0000701954  n/a   
 
 
-
 
NC_008532  STER_0934  XRE family transcriptional regulator  25.61 
 
 
285 aa  52.8  0.000003  Streptococcus thermophilus LMD-9  Bacteria  normal  0.173772  n/a   
 
 
-
 
NC_004116  SAG2158  Cro/CI family transcriptional regulator  27.22 
 
 
220 aa  51.2  0.000009  Streptococcus agalactiae 2603V/R  Bacteria  decreased coverage  0.000179355  n/a   
 
 
-
 
NC_004116  SAG0239  MutR family transcriptional regulator  28.72 
 
 
286 aa  47.8  0.00008  Streptococcus agalactiae 2603V/R  Bacteria  normal  n/a   
 
 
-
 
NC_008532  STER_1530  XRE family transcriptional regulator  22.42 
 
 
287 aa  45.1  0.0006  Streptococcus thermophilus LMD-9  Bacteria  normal  0.0128315  n/a   
 
 
-
 
NC_008531  LEUM_1916  XRE family transcriptional regulator  38.89 
 
 
315 aa  43.1  0.002  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  n/a   
 
 
-
 
NC_008532  STER_1919  XRE family transcriptional regulator  23.12 
 
 
290 aa  42.7  0.003  Streptococcus thermophilus LMD-9  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_2672  transcriptional regulator, XRE family  37.84 
 
 
118 aa  42  0.005  Anaerocellum thermophilum DSM 6725  Bacteria  unclonable  0.0000000000679525  n/a   
 
 
-
 
NC_008527  LACR_2551  XRE family transcriptional regulator  28.65 
 
 
279 aa  41.6  0.006  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  n/a   
 
 
-
 
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