| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LACR_1413 |
|---|
| Symbol | |
|---|
| ID | 4434067 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactococcus lactis subsp. cremoris SK11 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008527 |
|---|
| Strand | - |
|---|
| Start bp | 1326392 |
|---|
| End bp | 1327282 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 639667140 |
|---|
| Product | transcriptional regulator |
|---|
| Protein accession | YP_809350 |
|---|
| Protein GI | 116512134 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01716] transcriptional activator, Rgg/GadR/MutR family, C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00403461 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTATAAAA AATATGGAGA TTGTTTTAAA AAGTTGCGAA ACCAAAAGAA TTTAGGGTTA
TCATACTTTA GTAAACTTGG AATAGACCGT TCAAATATAT CTAGATTTGA ACATGGAAAA
TGTATGATGA GTTTTGAGCG TATAGATTTG ATGTTAGAAG AAATGCAAGT TCCGTTATCT
GAGTACGAAT TGATAGTAAA TAATTATATG CCGAATTTCC AAGAATTTTT TATATTAGAA
TTGGAAAAAG CTGAATTTAT CCAAAATCGA GATAAAATAA AAGAGTTGTA TTCTGAAGTC
AAAGAAACGG GGAATTATTT ACTGACGATT ACTGTGAAAA CGAAGCTTGG GAATATAAGT
CAGACAGAAG TTAAGGAAAT TGAAGCTTAT CTTTGCAATA TTGAAGAGTG GGGATATTTT
GAACTTACTT TATTTTATTT TGTATCTGAT TATCTCAATG TCAATCAATT AGAATTGCTG
CTTTTTAATT TTGATAAAAG ATGTGAAAAT TACTGTAGAG TCTTAAAATA TAGAAGGAGA
CTATTGCAAA TAGCCTATAA AAGTGTTGCG ATATACGCGG ACAACGGAGA AAGAAAAAAA
GCCGAAAATA TTTTAGAAAT GACTAAAAAA TATCGAACTG TGGGAGTCGA TTTATATTCA
GAAGTATTAA GACATCTTGC TAGAGCTATC ATTATTTTTA ATTTTGAAAA TGCAGGGGTT
GGGGAAGAAA AAATAAATTA TGCTCTTGAG ATTTTGGAAG AATTTGGAGG AAAGAAGATA
AAAGAATTCT ATCAGAATAA AATGGAAAAG TATTTGAACA GCTCAAAAGA GATTTTCTTT
ATTCTGGAGC ATATACTAGA GGGTGAAGAT AGGTTGTCTG AAGCATTATA A
|
|---|
| Protein sequence | MYKKYGDCFK KLRNQKNLGL SYFSKLGIDR SNISRFEHGK CMMSFERIDL MLEEMQVPLS
EYELIVNNYM PNFQEFFILE LEKAEFIQNR DKIKELYSEV KETGNYLLTI TVKTKLGNIS
QTEVKEIEAY LCNIEEWGYF ELTLFYFVSD YLNVNQLELL LFNFDKRCEN YCRVLKYRRR
LLQIAYKSVA IYADNGERKK AENILEMTKK YRTVGVDLYS EVLRHLARAI IIFNFENAGV
GEEKINYALE ILEEFGGKKI KEFYQNKMEK YLNSSKEIFF ILEHILEGED RLSEAL
|
|---|
| |