5 homologs were found in PanDaTox collection
for query gene Ksed_17940 on replicon NC_013169
Organism: Kytococcus sedentarius DSM 20547



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013169  Ksed_17940    100 
 
 
234 bp  464  1e-129  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal  0.679386 
 
 
-
 
NC_013169  Ksed_24520  integrase family protein  86.11 
 
 
987 bp  127  1e-27  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_1429  hypothetical protein  85.45 
 
 
582 bp  91.7  8e-17  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_0685    86.96 
 
 
992 bp  87.7  0.000000000000001  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_4847  Integrase catalytic region  83.19 
 
 
987 bp  77.8  0.000000000001  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
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