8 homologs were found in PanDaTox collection
for query gene Krad_3917 on replicon NC_009664
Organism: Kineococcus radiotolerans SRS30216



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009664  Krad_3917  hypothetical protein  100 
 
 
278 aa  534  1e-151  Kineococcus radiotolerans SRS30216  Bacteria  hitchhiker  0.005546  normal  0.0618918 
 
 
-
 
NC_014151  Cfla_2870  hypothetical protein  31.88 
 
 
362 aa  74.3  0.000000000002  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal  0.0175981 
 
 
-
 
NC_014151  Cfla_2896  hypothetical protein  34.2 
 
 
401 aa  68.9  0.00000000009  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal  0.102076 
 
 
-
 
NC_009664  Krad_3293  hypothetical protein  36.55 
 
 
277 aa  67  0.0000000004  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.995493  decreased coverage  0.00624598 
 
 
-
 
NC_002939  GSU1869  putative lipoprotein  30.37 
 
 
454 aa  45.1  0.001  Geobacter sulfurreducens PCA  Bacteria  normal  0.822905  n/a   
 
 
-
 
NC_013131  Caci_3832  parallel beta-helix repeat protein  35.8 
 
 
870 aa  43.1  0.005  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.133057  normal  0.144332 
 
 
-
 
NC_007517  Gmet_0577  parallel beta-helix repeat-containing protein  39.24 
 
 
262 aa  42.7  0.006  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_013525  Tter_1143  PKD domain containing protein  35.24 
 
 
1309 aa  42  0.01  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>