7 homologs were found in PanDaTox collection
for query gene Jann_R0019 on replicon NC_007802
Organism: Jannaschia sp. CCS1



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007802  Jann_R0019    100 
 
 		 215 bp  426  1e-117  Jannaschia sp. CCS1  Bacteria  normal  0.267707  normal  1 
 
 
-
 
NC_007925  RPC_R0026  Cobalamin riboswitch  94.12 
 
 		 216 bp  52  0.00006  Rhodopseudomonas palustris BisB18  Bacteria  normal  1  normal  0.134814 
 
 
-
 
NC_007802  Jann_R0034    96.43 
 
 		 189 bp  48.1  0.001  Jannaschia sp. CCS1  Bacteria  decreased coverage  0.00364064  hitchhiker  0.00265886 
 
 
-
 
NC_007947  Mfla_R0011    93.75 
 
 		 212 bp  48.1  0.001  Methylobacillus flagellatus KT  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007925  RPC_R0023  Cobalamin riboswitch  100 
 
 		 209 bp  46.1  0.004  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.568613  normal  0.0699635 
 
 
-
 
NC_007925  RPC_R0072  Cobalamin riboswitch  100 
 
 		 214 bp  46.1  0.004  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.944702  normal  1 
 
 
-
 
NC_007964  Nham_R0060    100 
 
 		 205 bp  46.1  0.004  Nitrobacter hamburgensis X14  Bacteria  normal  1  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>