10 homologs were found in PanDaTox collection
for query gene HMPREF0424_1263 on replicon NC_013721
Organism: Gardnerella vaginalis 409-05



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013721  HMPREF0424_1263  Raf-like protein  100 
 
 
183 aa  384  1e-106  Gardnerella vaginalis 409-05  Bacteria  n/a    hitchhiker  0.00227442 
 
 
-
 
NC_010816  BLD_1273  phospholipid-binding protein  61.96 
 
 
184 aa  244  4.9999999999999997e-64  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_0979  PEBP family protein  41.3 
 
 
171 aa  133  1.9999999999999998e-30  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_009632  SaurJH1_0998  PEBP family protein  41.3 
 
 
171 aa  133  1.9999999999999998e-30  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.516792  n/a   
 
 
-
 
NC_009513  Lreu_1780  PEBP family protein  38.06 
 
 
168 aa  100  2e-20  Lactobacillus reuteri DSM 20016  Bacteria  normal  n/a   
 
 
-
 
NC_008531  LEUM_0061  phospholipid-binding protein  34.15 
 
 
168 aa  97.8  7e-20  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  n/a   
 
 
-
 
NC_013204  Elen_2135  PEBP family protein  34.34 
 
 
170 aa  95.9  3e-19  Eggerthella lenta DSM 2243  Bacteria  hitchhiker  0.00000011706  normal 
 
 
-
 
NC_013517  Sterm_1141  PEBP family protein  33.1 
 
 
187 aa  75.9  0.0000000000003  Sebaldella termitidis ATCC 33386  Bacteria  normal  0.127497  n/a   
 
 
-
 
NC_010085  Nmar_0074  PEBP family protein  25.36 
 
 
149 aa  49.3  0.00003  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal 
 
 
-
 
NC_013743  Htur_2383  PEBP family protein  30.17 
 
 
153 aa  43.1  0.002  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
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