16 homologs were found in PanDaTox collection
for query gene GSU2324 on replicon NC_002939
Organism: Geobacter sulfurreducens PCA



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_002939  GSU2324  hypothetical protein  100 
 
 
123 aa  251  2.0000000000000002e-66  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_0122  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  78.05 
 
 
123 aa  199  9.999999999999999e-51  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_0609  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  52.85 
 
 
123 aa  131  3e-30  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0334  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  49.59 
 
 
123 aa  123  9e-28  Geobacter sp. M21  Bacteria  n/a    hitchhiker  3.47662e-22 
 
 
-
 
NC_011146  Gbem_0353  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  47.97 
 
 
123 aa  120  6e-27  Geobacter bemidjiensis Bem  Bacteria  normal  0.257976  n/a   
 
 
-
 
NC_007355  Mbar_A1959  hypothetical protein  36.13 
 
 
139 aa  87.4  5e-17  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_007355  Mbar_A1957  hypothetical protein  30.17 
 
 
136 aa  82.8  0.000000000000002  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_007355  Mbar_A3044  hypothetical protein  34.38 
 
 
139 aa  75.9  0.0000000000002  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.027632  normal  0.115821 
 
 
-
 
NC_011832  Mpal_2484  pyridoxamine 5'-phosphate oxidase-related FMN-binding  33.59 
 
 
139 aa  71.6  0.000000000003  Methanosphaerula palustris E1-9c  Archaea  normal  normal  0.151075 
 
 
-
 
NC_007796  Mhun_1288  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  29.37 
 
 
139 aa  68.2  0.00000000003  Methanospirillum hungatei JF-1  Archaea  hitchhiker  0.00753726  normal  0.21261 
 
 
-
 
NC_008554  Sfum_1116  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  32.79 
 
 
133 aa  67.4  0.00000000007  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.114511  normal 
 
 
-
 
NC_009943  Dole_1539  pyridoxamine 5'-phosphate oxidase-related FMN-binding  34.11 
 
 
127 aa  67.4  0.00000000007  Desulfococcus oleovorans Hxd3  Bacteria  decreased coverage  0.000000000588533  n/a   
 
 
-
 
NC_009051  Memar_0924  hypothetical protein  28.57 
 
 
134 aa  65.5  0.0000000002  Methanoculleus marisnigri JR1  Archaea  normal  0.387363  n/a   
 
 
-
 
NC_013223  Dret_1651  hypothetical protein  39.36 
 
 
125 aa  61.6  0.000000004  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.199687  normal 
 
 
-
 
NC_008782  Ajs_3714  putative GAF sensor protein  32.93 
 
 
448 aa  40.4  0.008  Acidovorax sp. JS42  Bacteria  normal  normal  0.865149 
 
 
-
 
NC_011992  Dtpsy_0480  putative phytochrome sensor protein  32.93 
 
 
448 aa  40.4  0.008  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
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