6 homologs were found in PanDaTox collection
for query gene EcDH1_3744 on replicon CP001637
Organism: Escherichia coli DH1



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
CP001637  EcDH1_3744  hypothetical protein  100 
 
 
604 aa  1224    Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_5774  hypothetical protein  80.63 
 
 
578 aa  932    Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
CP001509  ECD_04119  hypothetical protein  67.85 
 
 
550 aa  489  1e-137  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_04083  hypothetical protein  67.85 
 
 
550 aa  489  1e-137  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_010658  SbBS512_E4830  hypothetical protein  56.73 
 
 
226 aa  194  4e-48  Shigella boydii CDC 3083-94  Bacteria  normal  0.685032  n/a   
 
 
-
 
NC_008709  Ping_2816  TPR repeat-containing protein  43.68 
 
 
657 aa  50.8  0.00007  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>