5 homologs were found in PanDaTox collection
for query gene Dshi_0408 on replicon NC_009952
Organism: Dinoroseobacter shibae DFL 12



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009952  Dshi_0408  protein of unknown function DUF955  100 
 
 
240 aa  497  1e-140  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_007617  Nmul_D2822  hypothetical protein  52.52 
 
 
238 aa  249  2e-65  Nitrosospira multiformis ATCC 25196  Bacteria  normal  0.0598613  n/a   
 
 
-
 
NC_007406  Nwi_1262  hypothetical protein  29.87 
 
 
255 aa  50.4  0.00002  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.228551  normal  0.373581 
 
 
-
 
NC_009012  Cthe_1746  hypothetical protein  25.68 
 
 
262 aa  49.7  0.00004  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.0000113696  n/a   
 
 
-
 
NC_008576  Mmc1_2853  hypothetical protein  27.85 
 
 
216 aa  42  0.008  Magnetococcus sp. MC-1  Bacteria  normal  0.14989  normal  0.354963 
 
 
-
 
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