8 homologs were found in PanDaTox collection
for query gene Cpin_1575 on replicon NC_013132
Organism: Chitinophaga pinensis DSM 2588



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013132  Cpin_1575  hypothetical protein  100 
 
 
110 aa  218  1.9999999999999999e-56  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_5362  hypothetical protein  50 
 
 
108 aa  113  1.0000000000000001e-24  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.284993  normal 
 
 
-
 
NC_009441  Fjoh_1157  hypothetical protein  43.64 
 
 
108 aa  99.8  1e-20  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_009441  Fjoh_3975  hypothetical protein  39.09 
 
 
109 aa  93.2  1e-18  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_008255  CHU_0634  hypothetical protein  32.43 
 
 
106 aa  49.7  0.00001  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.150963  normal  0.256689 
 
 
-
 
NC_010571  Oter_4064  hypothetical protein  32.11 
 
 
121 aa  47.4  0.00007  Opitutus terrae PB90-1  Bacteria  normal  normal  0.988738 
 
 
-
 
NC_003910  CPS_2775  hypothetical protein  26.67 
 
 
119 aa  46.6  0.0001  Colwellia psychrerythraea 34H  Bacteria  normal  0.127465  n/a   
 
 
-
 
NC_014230  CA2559_08041  hypothetical protein  27.62 
 
 
113 aa  43.9  0.0008  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.343317  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>