9 homologs were found in PanDaTox collection
for query gene Coch_R0033 on replicon NC_013162
Organism: Capnocytophaga ochracea DSM 7271



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013162  Coch_R0033  tRNA-Arg  100 
 
 
74 bp  147  4.0000000000000006e-34  Capnocytophaga ochracea DSM 7271  Bacteria  normal  0.456547  n/a   
 
 
-
 
NC_009441  Fjoh_R0037  tRNA-Arg  92.31 
 
 
74 bp  71.9  0.00000000002  Flavobacterium johnsoniae UW101  Bacteria  normal  0.261059  n/a   
 
 
-
 
NC_014150  Bmur_R0035  tRNA-Arg  89.13 
 
 
74 bp  52  0.00002  Brachyspira murdochii DSM 12563  Bacteria  hitchhiker  2.2650599999999997e-20  n/a   
 
 
-
 
NC_009976  P9211_tRNAArgVIMSS1309368  tRNA-Arg  88.64 
 
 
74 bp  48.1  0.0003  Prochlorococcus marinus str. MIT 9211  Bacteria  normal  normal 
 
 
-
 
NC_007513  Syncc9902_R0037  tRNA-Arg  88.37 
 
 
74 bp  46.1  0.001  Synechococcus sp. CC9902  Bacteria  normal  n/a   
 
 
-
 
NC_007516  Syncc9605_R0012  tRNA-Arg  88.37 
 
 
74 bp  46.1  0.001  Synechococcus sp. CC9605  Bacteria  normal  normal 
 
 
-
 
NC_008817  P9515_tRNAArgVIMSS1309135  tRNA-Arg  87.23 
 
 
74 bp  46.1  0.001  Prochlorococcus marinus str. MIT 9515  Bacteria  normal  n/a   
 
 
-
 
NC_008820  P9303_tRNAArgVIMSS1309279  tRNA-Arg  88.37 
 
 
74 bp  46.1  0.001  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal  0.211711 
 
 
-
 
NC_011884  Cyan7425_R0019  tRNA-Arg  88.37 
 
 
76 bp  46.1  0.001  Cyanothece sp. PCC 7425  Bacteria  normal  0.2337  normal 
 
 
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