12 homologs were found in PanDaTox collection
for query gene CPR_1985 on replicon NC_008262
Organism: Clostridium perfringens SM101



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008262  CPR_1985  N-terminal truncated of elongation factor Ts  100 
 
 
207 aa  404  1.0000000000000001e-112  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_2270  UBA/TS-N domain-containing protein  94.71 
 
 
208 aa  332  2e-90  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_1347  ubiquitin-associated domain-containing protein  41.3 
 
 
136 aa  92.4  4e-18  Thermoanaerobacter sp. X514  Bacteria  unclonable  0.0000000000690799  n/a   
 
 
-
 
NC_007644  Moth_0602  hypothetical protein  38.3 
 
 
144 aa  81.6  0.000000000000007  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_013216  Dtox_3049  hypothetical protein  40.62 
 
 
141 aa  78.2  0.00000000000008  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.0255915  normal  0.0152403 
 
 
-
 
NC_011899  Hore_12470  hypothetical protein  40.62 
 
 
124 aa  72.8  0.000000000003  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_1536  ubiquitin-associated domain-containing protein  35.04 
 
 
151 aa  63.9  0.000000002  Desulfotomaculum reducens MI-1  Bacteria  normal  0.450314  n/a   
 
 
-
 
NC_009253  Dred_2474  hypothetical protein  34.19 
 
 
149 aa  57.8  0.0000001  Desulfotomaculum reducens MI-1  Bacteria  decreased coverage  0.0000687328  n/a   
 
 
-
 
NC_013216  Dtox_3056  ubiquitin-associated- domain-containing protein  31.08 
 
 
153 aa  57  0.0000002  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.275328  hitchhiker  0.00000312149 
 
 
-
 
NC_011884  Cyan7425_3243  hypothetical protein  37.5 
 
 
109 aa  47.8  0.0001  Cyanothece sp. PCC 7425  Bacteria  normal  0.517698  normal  0.545976 
 
 
-
 
NC_011830  Dhaf_2232  ubiquitin-associated- domain-containing protein  26.45 
 
 
183 aa  45.8  0.0005  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.488513  n/a   
 
 
-
 
NC_013170  Ccur_00290  UBA/TS-N domain-containing protein  42.11 
 
 
180 aa  42  0.006  Cryptobacterium curtum DSM 15641  Bacteria  normal  hitchhiker  0.00000331222 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>