12 homologs were found in PanDaTox collection
for query gene CPF_2270 on replicon NC_008261
Organism: Clostridium perfringens ATCC 13124



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008261  CPF_2270  UBA/TS-N domain-containing protein  100 
 
 
208 aa  407  1e-113  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_1985  N-terminal truncated of elongation factor Ts  97.6 
 
 
207 aa  347  7e-95  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_1347  ubiquitin-associated domain-containing protein  42.03 
 
 
136 aa  92.8  3e-18  Thermoanaerobacter sp. X514  Bacteria  unclonable  0.0000000000690799  n/a   
 
 
-
 
NC_007644  Moth_0602  hypothetical protein  37.59 
 
 
144 aa  79.7  0.00000000000003  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_013216  Dtox_3049  hypothetical protein  39.53 
 
 
141 aa  76.3  0.0000000000003  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.0255915  normal  0.0152403 
 
 
-
 
NC_011899  Hore_12470  hypothetical protein  37.98 
 
 
124 aa  69.3  0.00000000004  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_1536  ubiquitin-associated domain-containing protein  32.2 
 
 
151 aa  63.2  0.000000003  Desulfotomaculum reducens MI-1  Bacteria  normal  0.450314  n/a   
 
 
-
 
NC_009253  Dred_2474  hypothetical protein  35.59 
 
 
149 aa  57.8  0.0000001  Desulfotomaculum reducens MI-1  Bacteria  decreased coverage  0.0000687328  n/a   
 
 
-
 
NC_013216  Dtox_3056  ubiquitin-associated- domain-containing protein  29.53 
 
 
153 aa  57.8  0.0000001  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.275328  hitchhiker  0.00000312149 
 
 
-
 
NC_011884  Cyan7425_3243  hypothetical protein  35.94 
 
 
109 aa  46.2  0.0004  Cyanothece sp. PCC 7425  Bacteria  normal  0.517698  normal  0.545976 
 
 
-
 
NC_011830  Dhaf_2232  ubiquitin-associated- domain-containing protein  26.45 
 
 
183 aa  45.4  0.0006  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.488513  n/a   
 
 
-
 
NC_013170  Ccur_00290  UBA/TS-N domain-containing protein  42.11 
 
 
180 aa  42  0.006  Cryptobacterium curtum DSM 15641  Bacteria  normal  hitchhiker  0.00000331222 
 
 
-
 
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