12 homologs were found in PanDaTox collection
for query gene CPR_0633 on replicon NC_008262
Organism: Clostridium perfringens SM101



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008262  CPR_0633  replication protein  100 
 
 
368 aa  742    Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_008264  CPR_B0010  replication protein  89.7 
 
 
406 aa  632  1e-180  Clostridium perfringens SM101  Bacteria  normal  0.700386  n/a   
 
 
-
 
NC_012794  GWCH70_3466  replication protein  44.61 
 
 
437 aa  280  4e-74  Geobacillus sp. WCH70  Bacteria  normal  0.255263  normal  0.875759 
 
 
-
 
NC_013412  GYMC61_3576  replication protein  43.79 
 
 
439 aa  275  6e-73  Geobacillus sp. Y412MC61  Bacteria  normal  n/a   
 
 
-
 
NC_010724  Nther_2958  replication protein  36.81 
 
 
428 aa  165  1.0000000000000001e-39  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_2317  response regulator receiver protein  33.15 
 
 
464 aa  157  3e-37  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_012790  GWCH70_3471  replication protein  33.23 
 
 
448 aa  132  6.999999999999999e-30  Geobacillus sp. WCH70  Bacteria  normal  0.819035  n/a   
 
 
-
 
NC_013386  Adeg_2165  hypothetical protein  28.68 
 
 
452 aa  129  1.0000000000000001e-28  Ammonifex degensii KC4  Bacteria  hitchhiker  0.00029385  n/a   
 
 
-
 
NC_007964  Nham_0139  hypothetical protein  26.1 
 
 
632 aa  105  1e-21  Nitrobacter hamburgensis X14  Bacteria  normal  0.706868  n/a   
 
 
-
 
NC_010505  Mrad2831_2637  hypothetical protein  26.94 
 
 
591 aa  75.5  0.000000000002  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_5782  P4 family phage/plasmid primase  29.03 
 
 
978 aa  51.2  0.00003  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_2569  virulence-associated E  22.22 
 
 
697 aa  45.1  0.002  Anabaena variabilis ATCC 29413  Bacteria  hitchhiker  0.00313413  normal 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>