Gene Ava_2569 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2569 
Symbol 
ID3679593 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3176621 
End bp3178714 
Gene Length2094 bp 
Protein Length697 aa 
Translation table11 
GC content48% 
IMG OID637717916 
Productvirulence-associated E 
Protein accessionYP_323079 
Protein GI75908783 
COG category[R] General function prediction only 
COG ID[COG5545] Predicted P-loop ATPase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00313413 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCTA TTAACCCAAT TCTACACCAA AACTCTGACT ACGCGCAAGC TGAAACCTTC 
TTAAGCTTGC TATGTGGAGA CTCAGAAACA GCCGTCACTT GGCAAACCTT TGACGACAGC
GACAGCGAAC AGAAAGATAG AACACTAGCC CAGTGCTGGC ACGATACGTT AGCAAGCTCG
TGGAACAAAC TGCAACGACT GAACAACAAA GGTGCTGGCG TATTTGTCAC AGTGCAAGAG
ACAGACGGCA CAGGAGAGCG CAAGACAGCA AACGTAGTCC AAGTACGCGC GTTGTTCATC
GACTGTGATA ACGGTATACC CGATAGCTGG CATTTGCAGC CCAGTCTGAT TGTCTCTACC
AGTGCTGACA AGTGTCATGC TTACTGGTTG CTAGATGAGT CTGTGCAAGC GTCAGCCGAT
GAGTTCAGAG GTTGGCAAGA AAGGCTGATT GCTCACTATG GCTCAGACAA AGCTGTGAAG
GACTTGGCGC GAGTCATGAG GCTACCAGGG CTACTGCACA AGAAAGGCGA ACCCAAGCTG
GTAACTATCT TCGAGGCTTC GGGTACACGG TATGCAGTAG ATGAGATTAT GGATGGGTTA
CCAGAAGTTG GCAAGCCAGC CAAGGTAAAC CAGCCTAAGC CTAACTACTC TGATGCGAAC
TTCAGAGAGA AACTAGAACA TTTTGCCAAC AAACTAAAGC AAGCCAAGGA AGGCGAACGT
AACAGCACTC TGAACTCTAC CAAGTACACC TTAGCTGGCT TGTTCCCTGA CAAACTCGAA
GACATTGACA ACTGTCTATT CACTGTTGCA ACCGAGTGTC TAGGTTTGTC TGAAGAGGAA
ACCAGAGCAA CGTTAGCCAG TGCAAACACA GGAGCCAGTA AGCCGATTAC ACTAACTAGC
AACGGAGGCA AACGAAGCAA GAGTAACCTT ATGCGGGATA CCTTAGAGCA GTTATTTGGC
AACAGCTTAC AGTGGGATGA GATGCAGAAT AAGCTTAGGT TCAGAGGCAT TCACATGAGC
ATAGAGAAGC TACATGATAT CTGTGAAAGA GAGTTAGACC TAGACCTACC GTTCGATAAC
TTCCGTAGGA TTGCCTCTGT GATTGCACAA GACAACCCGT ATCATGCTGT CCGTTCTTAC
CTCCAGAGCC TCACAGCCGC AGAAGACCCA GAGCCTATTC TGTCTGCCCT CTACCAAGCA
ATGGGAATCA CCAACCGTTT ACATAGGCTG TATGTTCGTC GTTGGCTTGT GTCTGCTGTT
GCTCGTGCGC TTAACCCAGG ATGCAAGGCT GATTGCGCGC TTGTGCTACA GGGTAAGCAA
GGCATAGGTA AGACAACATT CTTTAGCAGT CTATTCGGTG AGTCCTTCCA GACGCTAGGG
GAACACAAGA GCGACGTAGA CCAACTGTTA GCCATGACTC GTAGCTGGTG TATCGAGTGG
GGCGAGATAG AGAACGCATT CAGTAAGAAA GCCGTGTCAG CCATTAAGTC ATTCATGAGC
ATAGAGCGTG ACACCTACCG TAGACCTTAC GCCAGTGAGC CTGACACCTA CCCAAGACAT
TTTGTTATTT GCGGAACAAC GAACCAGAGC GAATTTCTAA CAGACAGCAC AGGTAATCGT
AGGTTTTGGG TTGTCAACTT AGACCAACGA GTAGACACCA AAGCCGTAGA AGACATGAGA
GATGATGTCT GGTCAGCCGT GTTAGCTCTG TTCTTGGCTG GTGAACGCTG GCACTTGGAA
GGCGAGGAAG TCGAGAAAGC AGCAGAAGAT ACAGCCCAAT ACGAACAAGA TAACCCTTGG
ACAGAGAAAA TAACAGCCTA CACAGCGCGT CACAACCCTT GTACTGTTGC TGACATCATG
GAAAACGCTT TAGGCTTCGA CGTGAGCAAA CTGAACGATA AGAAAGCACA GGGAGATGTT
ACAGCTATCC TTCGTCAACT TGGTTACACA AAAGAACAGA AGCGGCTTAA CGGTGTAAAA
GCTAGGTACT GGTATCGCCC AACCCTAGAA AACACTAGCA CTGACGACGT AAGGGTAACT
AGAGACAACA TCCCTGCCGA AGAAAACATA GAATACTCAG AAGACCTTTA CTAA
 
Protein sequence
MKSINPILHQ NSDYAQAETF LSLLCGDSET AVTWQTFDDS DSEQKDRTLA QCWHDTLASS 
WNKLQRLNNK GAGVFVTVQE TDGTGERKTA NVVQVRALFI DCDNGIPDSW HLQPSLIVST
SADKCHAYWL LDESVQASAD EFRGWQERLI AHYGSDKAVK DLARVMRLPG LLHKKGEPKL
VTIFEASGTR YAVDEIMDGL PEVGKPAKVN QPKPNYSDAN FREKLEHFAN KLKQAKEGER
NSTLNSTKYT LAGLFPDKLE DIDNCLFTVA TECLGLSEEE TRATLASANT GASKPITLTS
NGGKRSKSNL MRDTLEQLFG NSLQWDEMQN KLRFRGIHMS IEKLHDICER ELDLDLPFDN
FRRIASVIAQ DNPYHAVRSY LQSLTAAEDP EPILSALYQA MGITNRLHRL YVRRWLVSAV
ARALNPGCKA DCALVLQGKQ GIGKTTFFSS LFGESFQTLG EHKSDVDQLL AMTRSWCIEW
GEIENAFSKK AVSAIKSFMS IERDTYRRPY ASEPDTYPRH FVICGTTNQS EFLTDSTGNR
RFWVVNLDQR VDTKAVEDMR DDVWSAVLAL FLAGERWHLE GEEVEKAAED TAQYEQDNPW
TEKITAYTAR HNPCTVADIM ENALGFDVSK LNDKKAQGDV TAILRQLGYT KEQKRLNGVK
ARYWYRPTLE NTSTDDVRVT RDNIPAEENI EYSEDLY