10 homologs were found in PanDaTox collection
for query gene Bphyt_4276 on replicon NC_010676
Organism: Burkholderia phytofirmans PsJN



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010676  Bphyt_4276  hypothetical protein  100 
 
 
105 aa  216  7e-56  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.416581 
 
 
-
 
NC_007952  Bxe_B0609  hypothetical protein  95.24 
 
 
105 aa  208  2e-53  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.203466 
 
 
-
 
NC_010623  Bphy_4438  hypothetical protein  70.27 
 
 
110 aa  150  5e-36  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_45950  regulatory protein RsaL  45.45 
 
 
80 aa  59.3  0.00000002  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_3899  regulatory protein RsaL  46.3 
 
 
69 aa  58.9  0.00000002  Pseudomonas aeruginosa PA7  Bacteria  normal  0.193953  n/a   
 
 
-
 
NC_011667  Tmz1t_2363  hypothetical protein  53.19 
 
 
86 aa  53.5  0.0000008  Thauera sp. MZ1T  Bacteria  hitchhiker  0.000851565  hitchhiker  0.0000226429 
 
 
-
 
NC_011667  Tmz1t_2341  hypothetical protein  50 
 
 
84 aa  50.8  0.000006  Thauera sp. MZ1T  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_1831  transcriptional regulator, XRE family  38.81 
 
 
97 aa  49.3  0.00002  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_0856  hypothetical protein  44.44 
 
 
102 aa  47  0.00009  Dechloromonas aromatica RCB  Bacteria  hitchhiker  1.90403e-25  unclonable  0.0000000671481 
 
 
-
 
NC_007614  Nmul_A1942  XRE family transcriptional regulator  43.75 
 
 
95 aa  44.3  0.0006  Nitrosospira multiformis ATCC 25196  Bacteria  normal  0.859039  n/a   
 
 
-
 
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