7 homologs were found in PanDaTox collection
for query gene BamMC406_6504 on replicon NC_010553
Organism: Burkholderia ambifaria MC40-6



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010553  BamMC406_6504  hypothetical protein  100 
 
 
337 aa  662    Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_010087  Bmul_5611  hypothetical protein  75.25 
 
 
336 aa  440  9.999999999999999e-123  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.49178  normal 
 
 
-
 
NC_010682  Rpic_1520  hypothetical protein  41.5 
 
 
356 aa  202  7e-51  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_012849  Rpic12D_5185  TrbL/VirB6 plasmid conjugal transfer protein  41.5 
 
 
356 aa  202  7e-51  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_007972  Rmet_6307  hypothetical protein  39.1 
 
 
350 aa  184  2.0000000000000003e-45  Cupriavidus metallidurans CH34  Bacteria  normal  0.689131  normal 
 
 
-
 
NC_008757  Pnap_4229  hypothetical protein  24.45 
 
 
407 aa  43.5  0.006  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.776633  normal 
 
 
-
 
NC_009621  Smed_5382  conjugal transfer protein TrbL  27.27 
 
 
402 aa  43.5  0.006  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.0685398 
 
 
-
 
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