| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5382 |
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| Symbol | |
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| ID | 5319684 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 347627 |
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| End bp | 348835 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640777152 |
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| Product | conjugal transfer protein TrbL |
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| Protein accession | YP_001314084 |
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| Protein GI | 150377489 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3846] Type IV secretory pathway, TrbL components |
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| TIGRFAM ID | [TIGR02783] P-type conjugative transfer protein TrbL |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0685398 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGAAGG TAACTCGTCC GTTCCTGATT GCCGGACTTT TATGCATAGC CTATTCAGCA
CCCGCTTTCG CACAAGAGGG ACACGTCCTC ACGGAACTGG AAAACCAAGT CTCGTCCGCT
GCGAAGGGGT GGGAGACCAC CATTATGAAT GCCGCACGAT CCCTATTTTG GATTCTGGCG
GCAATCGAGA TTGGTATAGC GGCCGTCTGG CTCGCCACTC AGGCCGCGTC GCTGGACAGC
TGGTTCGCCG AGCTGGTGCG GCGTATTATG TTCGTCGGCT TCTTCGCATT TATTCTGGAG
CAAGGTCCAA CTTTTGCGAG AGCCGTCGTC GACAGTCTTT TCCAGATTGG TGCGGACAGC
GATTCAGCTT CACCTGCTGA AGTATTCGAC GCCGGTATCC GCGTAGCCTC GCAAATGTCG
CAACAGGTAC AGTTTGGCGT CTTTGAGGAT AATGCCTTGG CGATCGCGGC GGTATTGGCG
ATGGGCGTCG TCGTCATTTG CTTCTCGCTT GTCGCAGCCA TTTTCGTGTC GGTCATGGTC
GAGATGTATG TTGGCCTCCT CGCCGGTATG ATCATGCTCG GACTGGGCGG CTCGTCCTTC
ACCAAGGACT TTGCTGTTCG GTACCTGATC TATGCTTTCG GCGTCGGCAT GAAGCTCATG
GCCCTGGTGA TGATCGCCAA GATAGGATCG AGCGTCCTGC TTGGCCTCGC GCAAGCCCCC
ACCGCATCAT CCGATAAATT CGTAACTGCC TTAGCGATCG CCGGTATTTC CGTCGTGGTC
TTCATCATCG CAATGTATGT GCCGACCATT CTTCAGGGTG TCGTCCAGGG CGCGTCCGTC
AGCGGAGGAA TGGAAGCGAT CCGCCATGGC GGACAGGCGG CATCGTTCGC CGCCGGTGCG
GGCTTCCTCG CCGCCGGTGC GGCCGGCGCT GGCTTTGAAG CGGGAAAGTT CGCACGAGCA
GCGGGTTCAT CCGTCGCAGG TGCGGCTCTT CGAAGTGTGG GTGCCGGAAT CGGGTCGGCA
GGACGCGCTG TGGGGTCCGC TGCCAAGGAA AAGGCAATCG GCGCTCCCGG TGCCTATGCC
GGATCCATTC TCGGACTAGC CAACGCAAAG CTCGACGAGC AACGCAGTGG GCTTAGCGAA
TCCCTCCCGA GCGCAACGAA ATCCCGTAAT CAGGAAGCGA AGGAAGATGG CAGTAAACCG
CACGCCTGA
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| Protein sequence | MVKVTRPFLI AGLLCIAYSA PAFAQEGHVL TELENQVSSA AKGWETTIMN AARSLFWILA
AIEIGIAAVW LATQAASLDS WFAELVRRIM FVGFFAFILE QGPTFARAVV DSLFQIGADS
DSASPAEVFD AGIRVASQMS QQVQFGVFED NALAIAAVLA MGVVVICFSL VAAIFVSVMV
EMYVGLLAGM IMLGLGGSSF TKDFAVRYLI YAFGVGMKLM ALVMIAKIGS SVLLGLAQAP
TASSDKFVTA LAIAGISVVV FIIAMYVPTI LQGVVQGASV SGGMEAIRHG GQAASFAAGA
GFLAAGAAGA GFEAGKFARA AGSSVAGAAL RSVGAGIGSA GRAVGSAAKE KAIGAPGAYA
GSILGLANAK LDEQRSGLSE SLPSATKSRN QEAKEDGSKP HA
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