5 homologs were found in PanDaTox collection
for query gene Avi_9862 on replicon NC_011986
Organism: Agrobacterium vitis S4



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011986  Avi_9862  cytochrome C-like protein  100 
 
 
194 aa  393  1e-109  Agrobacterium vitis S4  Bacteria  n/a    n/a   
 
 
-
 
NC_012858  Rleg_7163  putative cytochrome c-like protein  47.02 
 
 
178 aa  129  2.0000000000000002e-29  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.909027  normal  0.693773 
 
 
-
 
NC_011366  Rleg2_5857  putative cytochrome c-like protein  43.35 
 
 
179 aa  104  6e-22  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_009955  Dshi_3783  putative cytochrome c-like protein  32.83 
 
 
197 aa  88.2  6e-17  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal  0.550568 
 
 
-
 
NC_009957  Dshi_4059  putative cytochrome c-like protein  32.83 
 
 
197 aa  88.2  6e-17  Dinoroseobacter shibae DFL 12  Bacteria  normal  n/a   
 
 
-
 
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