4 homologs were found in PanDaTox collection
for query gene Avi_8054 on replicon NC_011982
Organism: Agrobacterium vitis S4



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011982  Avi_8054    100 
 
 
300 bp  595  1e-168  Agrobacterium vitis S4  Bacteria  normal  0.12055  n/a   
 
 
-
 
NC_011981  Avi_7067  conjugal transfer protein TraH  96.49 
 
 
651 bp  97.6  2e-18  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011981  Avi_7065  conjugal transfer pilin processing protease TraF  87.91 
 
 
510 bp  77.8  0.000000000002  Agrobacterium vitis S4  Bacteria  normal  0.622384  n/a   
 
 
-
 
NC_011982  Avi_8135  conjugal transfer protein TraH  91.11 
 
 
630 bp  58  0.000001  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
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