6 homologs were found in PanDaTox collection
for query gene Avi_7558 on replicon NC_011981
Organism: Agrobacterium vitis S4



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011981  Avi_7558  hypothetical protein  100 
 
 
336 aa  691    Agrobacterium vitis S4  Bacteria  normal  0.0501951  n/a   
 
 
-
 
NC_008698  Tpen_1284  ankyrin  30 
 
 
870 aa  49.7  0.00007  Thermofilum pendens Hrk 5  Archaea  normal  0.226002  n/a   
 
 
-
 
NC_012918  GM21_0819  Ankyrin  29.41 
 
 
269 aa  43.5  0.005  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00484639 
 
 
-
 
NC_007517  Gmet_2658  PDZ/DHR/GLGF:ankyrin  26.02 
 
 
1003 aa  43.1  0.006  Geobacter metallireducens GS-15  Bacteria  normal  normal  0.172871 
 
 
-
 
NC_010830  Aasi_1144  hypothetical protein  30.25 
 
 
2122 aa  43.5  0.006  Candidatus Amoebophilus asiaticus 5a2  Bacteria  n/a    normal 
 
 
-
 
NC_014150  Bmur_2701  Ankyrin  27.43 
 
 
385 aa  43.1  0.006  Brachyspira murdochii DSM 12563  Bacteria  normal  0.575669  n/a   
 
 
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