6 homologs were found in PanDaTox collection
for query gene Amir_3614 on replicon NC_013093
Organism: Actinosynnema mirum DSM 43827



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013093  Amir_3614  cyclase/dehydrase  100 
 
 
156 aa  313  7e-85  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_5760  cyclase/dehydrase  43.26 
 
 
161 aa  125  3e-28  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_5126  cyclase/dehydrase  46.26 
 
 
169 aa  123  9e-28  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_2552  cyclase/dehydrase  30.22 
 
 
155 aa  72.8  0.000000000002  Pseudomonas syringae pv. syringae B728a  Bacteria  decreased coverage  0.00196411  normal 
 
 
-
 
NC_014212  Mesil_1697  cyclase/dehydrase  27.03 
 
 
145 aa  59.7  0.00000002  Meiothermus silvanus DSM 9946  Bacteria  normal  0.128204  normal 
 
 
-
 
NC_013946  Mrub_1806  cyclase/dehydrase  25.97 
 
 
145 aa  49.3  0.00002  Meiothermus ruber DSM 1279  Bacteria  hitchhiker  0.0000623077  normal 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>