7 homologs were found in PanDaTox collection
for query gene Afer_R0045 on replicon NC_013124
Organism: Acidimicrobium ferrooxidans DSM 10331



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013124  Afer_R0045  tRNA-Leu  100 
 
 
82 bp  163  8.000000000000001e-39  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
NC_013730  Slin_R0057  tRNA-Leu  100 
 
 
85 bp  48.1  0.0003  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_012034  Athe_R0008  tRNA-Leu  100 
 
 
88 bp  46.1  0.001  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_2647  tRNA-Leu  92.11 
 
 
89 bp  44.1  0.005  Pseudomonas aeruginosa PA7  Bacteria  normal  0.794839  n/a   
 
 
-
 
NC_010513  Xfasm12_R0025  tRNA-Leu  96.15 
 
 
87 bp  44.1  0.005  Xylella fastidiosa M12  Bacteria  normal  0.262204  n/a   
 
 
-
 
NC_010577  XfasM23_R0025  tRNA-Leu  96.15 
 
 
87 bp  44.1  0.005  Xylella fastidiosa M23  Bacteria  normal  0.0926964  n/a   
 
 
-
 
NC_013131  Caci_R0007  tRNA-Leu  96.15 
 
 
84 bp  44.1  0.005  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.839395 
 
 
-
 
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