5 homologs were found in PanDaTox collection
for query gene Afer_1890 on replicon NC_013124
Organism: Acidimicrobium ferrooxidans DSM 10331



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013124  Afer_1890    100 
 
 
959 bp  1901    Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
NC_013124  Afer_1047    83.75 
 
 
485 bp  307  3.0000000000000004e-81  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
NC_013124  Afer_1622    94.17 
 
 
150 bp  182  1e-43  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_3544    100 
 
 
802 bp  50.1  0.001  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_007493  RSP_0220  hypothetical protein  100 
 
 
210 bp  48.1  0.005  Rhodobacter sphaeroides 2.4.1  Bacteria  hitchhiker  0.000075709  n/a   
 
 
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