18 homologs were found in PanDaTox collection
for query gene YPK_0885 on replicon NC_010465
Organism: Yersinia pseudotuberculosis YPIII



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010465  YPK_0885  regulatory CII family protein  100 
 
 		 177 aa  358  1e-98  Yersinia pseudotuberculosis YPIII  Bacteria  normal  1  n/a   
 
 
-
 
NC_012917  PC1_3156  regulatory CII family protein  60 
 
 		 169 aa  198  3e-50  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009436  Ent638_3511  phage regulatory CII family protein  51.79 
 
 		 169 aa  194  6e-49  Enterobacter sp. 638  Bacteria  normal  0.0375235  normal  0.0330317 
 
 
-
 
NC_011149  SeAg_B2880  phage regulatory protein  51.79 
 
 		 169 aa  193  8.000000000000001e-49  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.681066  n/a   
 
 
-
 
NC_009436  Ent638_1344  phage regulatory CII family protein  50.3 
 
 		 169 aa  192  2e-48  Enterobacter sp. 638  Bacteria  normal  0.0698035  normal  0.639346 
 
 
-
 
NC_010468  EcolC_2791  regulatory CII family protein  51.79 
 
 		 169 aa  189  2e-47  Escherichia coli ATCC 8739  Bacteria  normal  0.0447096  normal  0.027037 
 
 
-
 
NC_009800  EcHS_A0913  phage regulatory protein CII (CP76)  51.79 
 
 		 169 aa  188  2.9999999999999997e-47  Escherichia coli HS  Bacteria  hitchhiker  0.000458849  n/a   
 
 
-
 
NC_011080  SNSL254_A2948  regulatory protein CII bacteriophage 186  58.13 
 
 		 167 aa  187  5.999999999999999e-47  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.19102  hitchhiker  1.7132300000000003e-24 
 
 
-
 
NC_011083  SeHA_C3504  regulatory protein CII bacteriophage 186  57.5 
 
 		 167 aa  186  1e-46  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.359957  hitchhiker  2.61272e-20 
 
 
-
 
NC_012892  B21_00835  hypothetical protein  58.26 
 
 		 481 aa  148  4e-35  Escherichia coli BL21  Bacteria  normal  0.40375  n/a   
 
 
-
 
CP001509  ECD_00819  conserved hypothetical protein  58.26 
 
 		 481 aa  148  4e-35  Escherichia coli BL21(DE3)  Bacteria  normal  0.29421  n/a   
 
 
-
 
NC_009784  VIBHAR_05012  hypothetical protein  32.18 
 
 		 179 aa  85.5  3e-16  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009456  VC0395_1074  phage regulatory protein CII (CP76)  26.32 
 
 		 179 aa  64.7  0.0000000007  Vibrio cholerae O395  Bacteria  normal  1  n/a   
 
 
-
 
NC_008322  Shewmr7_0702  phage regulatory CII family protein  30.97 
 
 		 187 aa  64.3  0.0000000008  Shewanella sp. MR-7  Bacteria  normal  1  hitchhiker  0.000290373 
 
 
-
 
NC_009052  Sbal_1271  phage regulatory CII family protein  28.07 
 
 		 188 aa  62.8  0.000000003  Shewanella baltica OS155  Bacteria  normal  0.522635  n/a   
 
 
-
 
NC_011312  VSAL_I1012  phage regulatory protein CII  35.44 
 
 		 180 aa  53.9  0.000001  Aliivibrio salmonicida LFI1238  Bacteria  normal  1  n/a   
 
 
-
 
NC_007520  Tcr_0667  putative bacteriophage protein (Gp55-like)  30.25 
 
 		 142 aa  42.4  0.004  Thiomicrospira crunogena XCL-2  Bacteria  normal  0.631141  n/a   
 
 
-
 
NC_010086  Bmul_3852  hypothetical protein  25 
 
 		 148 aa  40.8  0.01  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.753191  hitchhiker  0.0000000217039 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>