17 homologs were found in PanDaTox collection
for query gene VIBHAR_05012 on replicon NC_009784
Organism: Vibrio harveyi ATCC BAA-1116



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009784  VIBHAR_05012  hypothetical protein  100 
 
 
179 aa  363  1e-100  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011312  VSAL_I1012  phage regulatory protein CII  46.82 
 
 
180 aa  164  5e-40  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_009456  VC0395_1074  phage regulatory protein CII (CP76)  43.1 
 
 
179 aa  152  2.9999999999999998e-36  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_3156  regulatory CII family protein  34.78 
 
 
169 aa  87  1e-16  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_3511  phage regulatory CII family protein  31.43 
 
 
169 aa  86.7  2e-16  Enterobacter sp. 638  Bacteria  normal  0.0375235  normal  0.0330317 
 
 
-
 
NC_011080  SNSL254_A2948  regulatory protein CII bacteriophage 186  34.73 
 
 
167 aa  86.7  2e-16  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.19102  hitchhiker  1.7132300000000003e-24 
 
 
-
 
NC_011083  SeHA_C3504  regulatory protein CII bacteriophage 186  34.13 
 
 
167 aa  85.1  5e-16  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.359957  hitchhiker  2.61272e-20 
 
 
-
 
NC_009436  Ent638_1344  phage regulatory CII family protein  30.06 
 
 
169 aa  80.1  0.00000000000002  Enterobacter sp. 638  Bacteria  normal  0.0698035  normal  0.639346 
 
 
-
 
NC_010465  YPK_0885  regulatory CII family protein  32.18 
 
 
177 aa  79.7  0.00000000000002  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_0702  phage regulatory CII family protein  31.74 
 
 
187 aa  75.1  0.0000000000005  Shewanella sp. MR-7  Bacteria  normal  hitchhiker  0.000290373 
 
 
-
 
NC_011149  SeAg_B2880  phage regulatory protein  29.65 
 
 
169 aa  75.1  0.0000000000005  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.681066  n/a   
 
 
-
 
NC_009052  Sbal_1271  phage regulatory CII family protein  34.18 
 
 
188 aa  73.9  0.000000000001  Shewanella baltica OS155  Bacteria  normal  0.522635  n/a   
 
 
-
 
NC_010468  EcolC_2791  regulatory CII family protein  28.49 
 
 
169 aa  72.8  0.000000000002  Escherichia coli ATCC 8739  Bacteria  normal  0.0447096  normal  0.027037 
 
 
-
 
CP001509  ECD_00819  conserved hypothetical protein  45.21 
 
 
481 aa  72.4  0.000000000003  Escherichia coli BL21(DE3)  Bacteria  normal  0.29421  n/a   
 
 
-
 
NC_012892  B21_00835  hypothetical protein  45.21 
 
 
481 aa  72.4  0.000000000003  Escherichia coli BL21  Bacteria  normal  0.40375  n/a   
 
 
-
 
NC_009800  EcHS_A0913  phage regulatory protein CII (CP76)  38.89 
 
 
169 aa  72.4  0.000000000004  Escherichia coli HS  Bacteria  hitchhiker  0.000458849  n/a   
 
 
-
 
NC_007520  Tcr_0667  putative bacteriophage protein (Gp55-like)  27.83 
 
 
142 aa  41.6  0.006  Thiomicrospira crunogena XCL-2  Bacteria  normal  0.631141  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>