Gene VSAL_I1012 details

Gene Information

• Locus tag: VSAL_I1012
• Symbol: cII
• ID: 6986782
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011312
• Strand: +
• Start bp: 1113931
• End bp: 1114473
• Gene Length: 543 bp
• Protein Length: 180 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 643379398
• Product: phage regulatory protein CII
• Protein accession: YP_002262501
• Protein GI: 209694573

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTTCAA ATATGGATAT GTGCGAATTA CGTGAGCGCA AACAGAAGCA GTATGACGCT 
GTTTGCAGTG ATTTCAGACT GAACCACAAC ATGGAAGAGT TGGCGATAAT AACAGGCATG 
AAAAGCGGCA CGTTATTACG CAATAGGTTA AACCCAGAAC AATCCCATAA GTTAGACCCA 
GTAGATTTAG CGATGCTGTG CAAAGCATCA AACGATTACA CCATTTTAAA TACGATGTTT 
GCAGATTTGG GCGTAGTCAC TATTGCTCTG CCAGGGCAGC AAGATGAAAA GAGTTATTTT 
GAAAGAACAC TTTTGAATAG CAAATACTCA GGTGAGCTTT CTAGCGATGC ATTGGACATG 
TGTAATGCAG AGCGTTTACC ACGCAGCAAA AAGCGAAAAA CATTAGCAAA AGCACAAGGC 
GCACTAAGTA ATTTAGTTTT GTTGATAAAT GATTTAGAGA ATCGCACCAC AGGCCTACAG 
CCAATATTGC AGTTTGGCAC AGATTTTTTG GCTAACGGTG CGCCACTTCC AGGTTTGATG 
TGA 

 

Protein sequence

MSSNMDMCEL RERKQKQYDA VCSDFRLNHN MEELAIITGM KSGTLLRNRL NPEQSHKLDP 
VDLAMLCKAS NDYTILNTMF ADLGVVTIAL PGQQDEKSYF ERTLLNSKYS GELSSDALDM 
CNAERLPRSK KRKTLAKAQG ALSNLVLLIN DLENRTTGLQ PILQFGTDFL ANGAPLPGLM