11 homologs were found in PanDaTox collection
for query gene Xfasm12_1129 on replicon NC_010513
Organism: Xylella fastidiosa M12



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010513  Xfasm12_1129  putative transcriptional regulator  100 
 
 		 51 aa  105  2e-22  Xylella fastidiosa M12  Bacteria  normal  0.290491  n/a   
 
 
-
 
NC_010577  XfasM23_1151  XRE family transcriptional regulator  92.16 
 
 		 110 aa  95.9  2e-19  Xylella fastidiosa M23  Bacteria  normal  0.736435  n/a   
 
 
-
 
NC_010577  XfasM23_1009  XRE family transcriptional regulator  88.24 
 
 		 110 aa  94  6e-19  Xylella fastidiosa M23  Bacteria  normal  1  n/a   
 
 
-
 
NC_007794  Saro_2731  XRE family transcriptional regulator  40 
 
 		 166 aa  45.8  0.0002  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  1  n/a   
 
 
-
 
NC_007517  Gmet_0317  XRE family transcriptional regulator  44.44 
 
 		 103 aa  42.7  0.002  Geobacter metallireducens GS-15  Bacteria  normal  1  normal  0.0550269 
 
 
-
 
NC_008781  Pnap_0386  helix-turn-helix domain-containing protein  45.24 
 
 		 201 aa  42  0.003  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.425253  normal  0.20556 
 
 
-
 
NC_010581  Bind_3174  XRE family transcriptional regulator  48.84 
 
 		 92 aa  41.2  0.005  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.024202  normal  0.0514125 
 
 
-
 
NC_011989  Avi_3788  hypothetical protein  46.51 
 
 		 68 aa  40.8  0.007  Agrobacterium vitis S4  Bacteria  normal  0.839314  n/a   
 
 
-
 
NC_012560  Avin_04240  Transcriptional regulator with Fis-type helix-turn-helix motif  42.22 
 
 		 94 aa  40.8  0.007  Azotobacter vinelandii DJ  Bacteria  normal  1  n/a   
 
 
-
 
NC_009052  Sbal_1261  helix-turn-helix domain-containing protein  38.64 
 
 		 146 aa  40.4  0.008  Shewanella baltica OS155  Bacteria  normal  1  n/a   
 
 
-
 
NC_007484  Noc_0283  XRE family transcriptional regulator  42.86 
 
 		 102 aa  40  0.01  Nitrosococcus oceani ATCC 19707  Bacteria  normal  1  n/a   
 
 
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