8 homologs were found in PanDaTox collection
for query gene Vapar_5790 on replicon NC_012792
Organism: Variovorax paradoxus S110



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012792  Vapar_5790  hypothetical protein  100 
 
 
176 aa  357  4e-98  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007511  Bcep18194_B1335  hypothetical protein  36.81 
 
 
179 aa  72  0.000000000004  Burkholderia sp. 383  Bacteria  normal  normal  0.389928 
 
 
-
 
NC_008752  Aave_3473  hypothetical protein  33.14 
 
 
177 aa  69.3  0.00000000003  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.756221 
 
 
-
 
NC_010515  Bcenmc03_5789  hypothetical protein  34.62 
 
 
179 aa  69.3  0.00000000003  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.485812  normal 
 
 
-
 
NC_010515  Bcenmc03_5262  hypothetical protein  30.72 
 
 
179 aa  65.1  0.0000000006  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008061  Bcen_3853  hypothetical protein  33.33 
 
 
179 aa  56.6  0.0000002  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.132756  n/a   
 
 
-
 
NC_008543  Bcen2424_4515  hypothetical protein  33.33 
 
 
179 aa  56.6  0.0000002  Burkholderia cenocepacia HI2424  Bacteria  normal  0.028542  normal 
 
 
-
 
NC_010501  PputW619_2527  hypothetical protein  28.21 
 
 
176 aa  46.2  0.0003  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
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