Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_5790 |
Symbol | |
ID | 7974911 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012792 |
Strand | - |
Start bp | 492103 |
End bp | 492633 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644796371 |
Product | hypothetical protein |
Protein accession | YP_002947645 |
Protein GI | 239820460 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACGATC CCGCTCGAAT CGACTTCCCC TTGCTCACTG AAGAGATTCG CGAAGGTGCT CGCCGCGCCT TCCAGGCCAT CCGCGCGGCC CATCCTGACG AGACCATCCG CCTTTTCTCG CTCGGCAGCG ATGACGGCGC GATGACCATC GTCCATGCTG CCGGCCATCT CGCTTTGGGC GCTCCGGGCG ACATGGACGA TGAAAGCGAG GTCTGGTGCT CCGCCGAGTG GCCCTACGCG GAGGGCGGTG AGTTCCTCGA CATCGCCTAC CGCATGATCC TGCCATGCCA CCGCAGCGAC CTGCCTTGCG ACGTTGAATT CGACGTCCTG TACGCAGGCC TGTTCGAGGC TTGCATTGCC GCCATGGAAC AACTCGATCG TGAAGGCTTC TTCGGCACCG GCGATGCGCG TGAAGAGGTT GTGCTGCTAT GCCAGATCGA AGGCAACGAG GATATGGAAG GCTCGATCGG CCGGCTCAAC ACTTCTCGCG TGGTGGGCCG GCTCGAACGC TGGATCAAGC TCTGCGAATG A
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Protein sequence | MHDPARIDFP LLTEEIREGA RRAFQAIRAA HPDETIRLFS LGSDDGAMTI VHAAGHLALG APGDMDDESE VWCSAEWPYA EGGEFLDIAY RMILPCHRSD LPCDVEFDVL YAGLFEACIA AMEQLDREGF FGTGDAREEV VLLCQIEGNE DMEGSIGRLN TSRVVGRLER WIKLCE
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