40 homologs were found in PanDaTox collection
for query gene Vapar_3085 on replicon NC_012791
Organism: Variovorax paradoxus S110



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_012791  Vapar_3085  beta-ribofuranosylaminobenzene 5'-phosphate synthase family  100 
 
 		 348 aa  679    Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
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NC_010625  Bphy_5949  beta-ribofuranosylaminobenzene 5'-phosphate synthase  50.92 
 
 		 339 aa  311  7.999999999999999e-84  Burkholderia phymatum STM815  Bacteria  normal  1  decreased coverage  0.00300733 
 
 
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NC_010524  Lcho_3153  beta-ribofuranosylaminobenzene 5'-phosphate synthase  62.16 
 
 		 375 aa  310  2e-83  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  1 
 
 
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NC_008825  Mpe_A2606  beta-ribofuranosylaminobenzene 5'-phosphate synthase  58.15 
 
 		 342 aa  267  2e-70  Methylibium petroleiphilum PM1  Bacteria  normal  0.614879  normal  1 
 
 
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NC_007952  Bxe_B2430  beta-ribofuranosylaminobenzene 5'-phosphate synthase  49.85 
 
 		 342 aa  259  5.0000000000000005e-68  Burkholderia xenovorans LB400  Bacteria  normal  0.100364  normal  0.840747 
 
 
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NC_010625  Bphy_6481  beta-ribofuranosylaminobenzene 5'-phosphate synthase  46.57 
 
 		 355 aa  256  3e-67  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.321836 
 
 
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NC_010505  Mrad2831_0527  beta-ribofuranosylaminobenzene 5'-phosphate synthase  44.44 
 
 		 325 aa  211  1e-53  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.856491 
 
 
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NC_002977  MCA2861  GHMP family kinase  41.56 
 
 		 347 aa  209  5e-53  Methylococcus capsulatus str. Bath  Bacteria  normal  0.480231  n/a   
 
 
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NC_007947  Mfla_1661  beta-ribofuranosylaminobenzene 5'-phosphate synthase  39.23 
 
 		 310 aa  205  8e-52  Methylobacillus flagellatus KT  Bacteria  hitchhiker  0.00577565  normal  0.473342 
 
 
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NC_011666  Msil_2384  beta-ribofuranosylaminobenzene 5'-phosphate synthase family  41.85 
 
 		 339 aa  201  9.999999999999999e-51  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_011894  Mnod_6001  beta-ribofuranosylaminobenzene 5'-phosphate synthase family  43.48 
 
 		 333 aa  200  3e-50  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.498595  n/a   
 
 
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NC_010511  M446_5777  beta-ribofuranosylaminobenzene 5'-phosphate synthase  43.12 
 
 		 323 aa  200  3e-50  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011757  Mchl_2163  beta-ribofuranosylaminobenzene 5'-phosphate synthase family  42.81 
 
 		 340 aa  199  6e-50  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.0673427  normal  0.202366 
 
 
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NC_010725  Mpop_1779  beta-ribofuranosylaminobenzene 5'-phosphate synthase family  42.68 
 
 		 333 aa  199  7e-50  Methylobacterium populi BJ001  Bacteria  normal  0.0409011  normal  1 
 
 
-
 
NC_010172  Mext_1828  beta-ribofuranosylaminobenzene 5'-phosphate synthase  42.81 
 
 		 340 aa  199  7.999999999999999e-50  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009720  Xaut_3535  beta-ribofuranosylaminobenzene 5'-phosphate synthase  40.62 
 
 		 322 aa  189  5.999999999999999e-47  Xanthobacter autotrophicus Py2  Bacteria  normal  1  normal  0.904151 
 
 
-
 
NC_014148  Plim_2423  beta-ribofuranosylaminobenzene 5'-phosphate synthase family  33.64 
 
 		 325 aa  145  8.000000000000001e-34  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.165612  n/a   
 
 
-
 
NC_008553  Mthe_0935  beta-ribofuranosylaminobenzene 5'-phosphate synthase  28.65 
 
 		 509 aa  139  7e-32  Methanosaeta thermophila PT  Archaea  normal  1  n/a   
 
 
-
 
NC_009135  MmarC5_1394  beta-ribofuranosylaminobenzene 5'-phosphate synthase  29.08 
 
 		 325 aa  128  1.0000000000000001e-28  Methanococcus maripaludis C5  Archaea  normal  0.813401  n/a   
 
 
-
 
NC_011832  Mpal_1624  beta-ribofuranosylaminobenzene 5'-phosphate synthase family  29.67 
 
 		 524 aa  128  1.0000000000000001e-28  Methanosphaerula palustris E1-9c  Archaea  normal  0.931737  normal  0.205569 
 
 
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NC_009637  MmarC7_1282  beta-ribofuranosylaminobenzene 5'-phosphate synthase  28.57 
 
 		 325 aa  127  2.0000000000000002e-28  Methanococcus maripaludis C7  Archaea  normal  0.232636  normal  1 
 
 
-
 
NC_009051  Memar_0701  beta-ribofuranosylaminobenzene 5'-phosphate synthase  32.15 
 
 		 515 aa  127  2.0000000000000002e-28  Methanoculleus marisnigri JR1  Archaea  normal  0.187582  n/a   
 
 
-
 
NC_009975  MmarC6_0674  beta-ribofuranosylaminobenzene 5'-phosphate synthase  28.52 
 
 		 325 aa  124  2e-27  Methanococcus maripaludis C6  Archaea  normal  0.2271  n/a   
 
 
-
 
NC_007355  Mbar_A0806  beta-ribofuranosylaminobenzene 5'-phosphate synthase  30.06 
 
 		 321 aa  119  7e-26  Methanosarcina barkeri str. Fusaro  Archaea  normal  1  normal  1 
 
 
-
 
NC_009635  Maeo_0244  beta-ribofuranosylaminobenzene 5'-phosphate synthase  26.05 
 
 		 335 aa  118  1.9999999999999998e-25  Methanococcus aeolicus Nankai-3  Archaea  normal  1  n/a   
 
 
-
 
NC_007355  Mbar_A1222  beta-ribofuranosylaminobenzene 5'-phosphate synthase  29.05 
 
 		 318 aa  114  3e-24  Methanosarcina barkeri str. Fusaro  Archaea  normal  1  normal  1 
 
 
-
 
NC_009634  Mevan_1290  beta-ribofuranosylaminobenzene 5'-phosphate synthase  26.64 
 
 		 325 aa  113  5e-24  Methanococcus vannielii SB  Archaea  normal  1  n/a   
 
 
-
 
NC_007955  Mbur_1563  beta-ribofuranosylaminobenzene 5'-phosphate synthase  28.48 
 
 		 319 aa  110  5e-23  Methanococcoides burtonii DSM 6242  Archaea  hitchhiker  0.00013135  n/a   
 
 
-
 
NC_013158  Huta_2356  beta-ribofuranosylaminobenzene 5'-phosphate synthase family  32.02 
 
 		 322 aa  105  9e-22  Halorhabdus utahensis DSM 12940  Archaea  normal  0.37342  n/a   
 
 
-
 
NC_013743  Htur_2109  beta-ribofuranosylaminobenzene 5'-phosphate synthase family  33.67 
 
 		 328 aa  104  3e-21  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_007796  Mhun_1148  GHMP kinase group 1  27.83 
 
 		 519 aa  103  4e-21  Methanospirillum hungatei JF-1  Archaea  normal  0.820316  normal  1 
 
 
-
 
NC_013922  Nmag_0626  beta-ribofuranosylaminobenzene 5'-phosphate synthase family  31.99 
 
 		 345 aa  99.8  7e-20  Natrialba magadii ATCC 43099  Archaea  normal  1  n/a   
 
 
-
 
NC_013202  Hmuk_1348  beta-ribofuranosylaminobenzene 5'-phosphate synthase family  32.15 
 
 		 326 aa  96.3  7e-19  Halomicrobium mukohataei DSM 12286  Archaea  normal  1  normal  0.0110253 
 
 
-
 
NC_012029  Hlac_2038  beta-ribofuranosylaminobenzene 5'-phosphate synthase family  34.02 
 
 		 333 aa  93.6  5e-18  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  0.172756  normal  0.249661 
 
 
-
 
NC_009953  Sare_0579  beta-ribofuranosylaminobenzene 5'-phosphate synthase  29.96 
 
 		 337 aa  64.3  0.000000003  Salinispora arenicola CNS-205  Bacteria  normal  0.195323  normal  0.392757 
 
 
-
 
NC_009440  Msed_1616  beta-ribofuranosylaminobenzene 5'-phosphate synthase  26.87 
 
 		 284 aa  61.2  0.00000003  Metallosphaera sedula DSM 5348  Archaea  normal  1  normal  1 
 
 
-
 
NC_008254  Meso_2350  beta-ribofuranosylaminobenzene 5'-phosphate synthase  31.55 
 
 		 327 aa  59.7  0.00000007  Chelativorans sp. BNC1  Bacteria  normal  1  n/a   
 
 
-
 
CP001800  Ssol_1345  beta-ribofuranosylaminobenzene 5'-phosphate synthase family  26.61 
 
 		 292 aa  57.4  0.0000003  Sulfolobus solfataricus 98/2  Archaea  normal  0.380612  n/a   
 
 
-
 
NC_007964  Nham_0792  sugar kinase-like protein  25.95 
 
 		 310 aa  53.5  0.000006  Nitrobacter hamburgensis X14  Bacteria  normal  0.178094  n/a   
 
 
-
 
NC_008345  Sfri_3142  beta-ribofuranosylaminobenzene 5'-phosphate synthase family protein  19.57 
 
 		 328 aa  49.3  0.0001  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.336042  n/a   
 
 
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