56 homologs were found in PanDaTox collection
for query gene Tfu_2453 on replicon NC_007333
Organism: Thermobifida fusca YX



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007333  Tfu_2453  succinate dehydrogenase subunit C  100 
 
 		 238 aa  480  1e-134  Thermobifida fusca YX  Bacteria  normal  1  n/a   
 
 
-
 
NC_014210  Ndas_3923  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  67.78 
 
 		 235 aa  310  1e-83  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013169  Ksed_23340  succinate dehydrogenase/fumarate reductase cytochrome b subunit, b558 family  44.96 
 
 		 231 aa  211  7.999999999999999e-54  Kytococcus sedentarius DSM 20547  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009380  Strop_1710  succinate dehydrogenase/fumarate reductase cytochrome b subunit  49.57 
 
 		 227 aa  207  1e-52  Salinispora tropica CNB-440  Bacteria  normal  0.0407721  normal  0.47892 
 
 
-
 
NC_008699  Noca_3551  succinate dehydrogenase subunit C  44.77 
 
 		 233 aa  207  1e-52  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_013757  Gobs_1054  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  42.86 
 
 		 231 aa  206  3e-52  Geodermatophilus obscurus DSM 43160  Bacteria  normal  1  n/a   
 
 
-
 
NC_009953  Sare_1707  succinate dehydrogenase/fumarate reductase cytochrome b subunit  49.15 
 
 		 230 aa  197  7.999999999999999e-50  Salinispora arenicola CNS-205  Bacteria  normal  1  hitchhiker  0.00155149 
 
 
-
 
NC_007777  Francci3_3465  succinate dehydrogenase subunit C  43.56 
 
 		 246 aa  193  2e-48  Frankia sp. CcI3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013510  Tcur_1123  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  45.99 
 
 		 232 aa  193  3e-48  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_009921  Franean1_1278  succinate dehydrogenase/fumarate reductase cytochrome b subunit  46.22 
 
 		 234 aa  187  1e-46  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.563199 
 
 
-
 
NC_013595  Sros_8458  succinate dehydrogenase, cytochrome b subunit  43.7 
 
 		 253 aa  176  2e-43  Streptosporangium roseum DSM 43021  Bacteria  normal  0.70376  normal  1 
 
 
-
 
NC_013947  Snas_5226  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  43.33 
 
 		 232 aa  177  2e-43  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.659041  normal  1 
 
 
-
 
NC_013131  Caci_0384  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  37.76 
 
 		 234 aa  173  1.9999999999999998e-42  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.556008  normal  0.820054 
 
 
-
 
NC_009767  Rcas_3079  succinate dehydrogenase/fumarate reductase cytochrome b subunit  44.44 
 
 		 226 aa  170  1e-41  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011831  Cagg_1576  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  41.45 
 
 		 239 aa  162  3e-39  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.790909  normal  1 
 
 
-
 
NC_009523  RoseRS_2400  succinate dehydrogenase/fumarate reductase cytochrome b subunit  43.11 
 
 		 226 aa  148  7e-35  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013739  Cwoe_5262  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  35.53 
 
 		 256 aa  135  6.0000000000000005e-31  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  0.277764 
 
 
-
 
NC_009972  Haur_1734  succinate dehydrogenase/fumarate reductase cytochrome b subunit  38.16 
 
 		 223 aa  133  3e-30  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.776584  n/a   
 
 
-
 
NC_009675  Anae109_2602  succinate dehydrogenase/fumarate reductase cytochrome b subunit  37 
 
 		 230 aa  127  1.0000000000000001e-28  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007760  Adeh_2636  succinate dehydrogenase subunit C  33.61 
 
 		 232 aa  115  6.9999999999999995e-25  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.189962  n/a   
 
 
-
 
NC_011145  AnaeK_2722  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  33.92 
 
 		 221 aa  114  1.0000000000000001e-24  Anaeromyxobacter sp. K  Bacteria  normal  1  n/a   
 
 
-
 
NC_010571  Oter_0671  succinate dehydrogenase/fumarate reductase cytochrome b subunit  36 
 
 		 253 aa  113  3e-24  Opitutus terrae PB90-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011891  A2cp1_2817  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  33.48 
 
 		 221 aa  111  1.0000000000000001e-23  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.893711  n/a   
 
 
-
 
NC_014151  Cfla_1918  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  36.52 
 
 		 248 aa  108  6e-23  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.48387  normal  1 
 
 
-
 
NC_009483  Gura_3257  succinate dehydrogenase/fumarate reductase cytochrome b subunit  30.7 
 
 		 219 aa  102  5e-21  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.000000103645  n/a   
 
 
-
 
NC_007760  Adeh_2934  succinate dehydrogenase subunit C  32.77 
 
 		 221 aa  100  2e-20  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  1  n/a   
 
 
-
 
NC_007498  Pcar_0446  succinate dehydrogenase/fumarate reductase, cytochrome b subunit  30.7 
 
 		 223 aa  100  2e-20  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.0000000043641  n/a   
 
 
-
 
NC_011891  A2cp1_3127  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  31.91 
 
 		 221 aa  97.8  1e-19  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011145  AnaeK_3020  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  31.91 
 
 		 221 aa  97.8  1e-19  Anaeromyxobacter sp. K  Bacteria  normal  0.197929  n/a   
 
 
-
 
NC_010655  Amuc_0986  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  30.2 
 
 		 233 aa  97.4  2e-19  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  0.190764  normal  0.959903 
 
 
-
 
NC_011146  Gbem_3334  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  30.87 
 
 		 221 aa  93.6  3e-18  Geobacter bemidjiensis Bem  Bacteria  decreased coverage  0.0000562871  n/a   
 
 
-
 
NC_013440  Hoch_5881  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  31.42 
 
 		 228 aa  92.4  5e-18  Haliangium ochraceum DSM 14365  Bacteria  normal  0.0369538  normal  1 
 
 
-
 
NC_008609  Ppro_2483  succinate dehydrogenase/fumarate reductase cytochrome b subunit  28.81 
 
 		 221 aa  92.4  6e-18  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.00000000324383  n/a   
 
 
-
 
NC_002939  GSU1176  fumarate reductase, cytochrome b subunit, putative  30.6 
 
 		 220 aa  91.7  1e-17  Geobacter sulfurreducens PCA  Bacteria  decreased coverage  0.000804206  n/a   
 
 
-
 
NC_007517  Gmet_2397  succinate dehydrogenase subunit C  31.91 
 
 		 220 aa  91.3  1e-17  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.000000000000157614  normal  1 
 
 
-
 
NC_010814  Glov_2214  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  27.85 
 
 		 222 aa  89.7  4e-17  Geobacter lovleyi SZ  Bacteria  hitchhiker  0.00000205713  n/a   
 
 
-
 
NC_009943  Dole_1555  succinate dehydrogenase/fumarate reductase cytochrome b subunit  32.39 
 
 		 212 aa  89.4  5e-17  Desulfococcus oleovorans Hxd3  Bacteria  normal  1  n/a   
 
 
-
 
NC_012918  GM21_0912  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  29.57 
 
 		 221 aa  88.6  8e-17  Geobacter sp. M21  Bacteria  n/a    hitchhiker  8.63584e-33 
 
 
-
 
NC_013061  Phep_3265  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  32.02 
 
 		 224 aa  80.9  0.00000000000001  Pedobacter heparinus DSM 2366  Bacteria  normal  0.0102296  normal  0.074852 
 
 
-
 
NC_008639  Cpha266_0102  succinate dehydrogenase subunit C  29.46 
 
 		 242 aa  80.5  0.00000000000002  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  1  n/a   
 
 
-
 
NC_013730  Slin_5011  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  29.91 
 
 		 231 aa  79.7  0.00000000000004  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008255  CHU_2472  succinate dehydrogenase subunit C  30.29 
 
 		 234 aa  77  0.0000000000002  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  1  normal  0.088296 
 
 
-
 
NC_013162  Coch_0242  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  29.41 
 
 		 224 aa  76.3  0.0000000000004  Capnocytophaga ochracea DSM 7271  Bacteria  normal  0.463951  n/a   
 
 
-
 
NC_013037  Dfer_3969  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  28.76 
 
 		 223 aa  75.5  0.0000000000006  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.539858  normal  0.938313 
 
 
-
 
NC_011060  Ppha_2853  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  28.51 
 
 		 220 aa  74.7  0.000000000001  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_010803  Clim_2443  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  28.19 
 
 		 231 aa  72.8  0.000000000004  Chlorobium limicola DSM 245  Bacteria  normal  1  n/a   
 
 
-
 
NC_013132  Cpin_6536  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  29.58 
 
 		 229 aa  70.1  0.00000000003  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0147302  normal  0.421545 
 
 
-
 
NC_007512  Plut_2082  succinate dehydrogenase, cytochrome b558 subunit  29.33 
 
 		 217 aa  69.7  0.00000000004  Chlorobium luteolum DSM 273  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014230  CA2559_04700  Succinate dehydrogenase, cytochrome b558 subunit  29.36 
 
 		 239 aa  67.4  0.0000000002  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.142799  n/a   
 
 
-
 
NC_014148  Plim_2451  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  30.45 
 
 		 263 aa  66.6  0.0000000003  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.260267  n/a   
 
 
-
 
NC_002950  PG1616  hypothetical protein  25.66 
 
 		 230 aa  62.8  0.000000004  Porphyromonas gingivalis W83  Bacteria  n/a    normal  1 
 
 
-
 
NC_009441  Fjoh_0677  succinate dehydrogenase/fumarate reductase cytochrome b subunit  25.78 
 
 		 221 aa  58.5  0.00000009  Flavobacterium johnsoniae UW101  Bacteria  normal  0.330554  n/a   
 
 
-
 
NC_007604  Synpcc7942_0314  succinate dehydrogenase subunit C  27.49 
 
 		 209 aa  57.4  0.0000002  Synechococcus elongatus PCC 7942  Bacteria  normal  0.884437  normal  1 
 
 
-
 
NC_007514  Cag_1935  succinate dehydrogenase, cytochrome b558 subunit  27.06 
 
 		 221 aa  57.4  0.0000002  Chlorobium chlorochromatii CaD3  Bacteria  normal  1  n/a   
 
 
-
 
NC_013061  Phep_0210  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  25.56 
 
 		 209 aa  57  0.0000003  Pedobacter heparinus DSM 2366  Bacteria  normal  1  normal  0.178557 
 
 
-
 
NC_013205  Aaci_1863  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  25.91 
 
 		 208 aa  47  0.0003  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>