8 homologs were found in PanDaTox collection
for query gene Tcr_1943 on replicon NC_007520
Organism: Thiomicrospira crunogena XCL-2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007520  Tcr_1943  hypothetical protein  100 
 
 
342 aa  707    Thiomicrospira crunogena XCL-2  Bacteria  normal  0.931712  n/a   
 
 
-
 
NC_011901  Tgr7_0597  hypothetical protein  35.78 
 
 
157 aa  78.2  0.0000000000002  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_3673  hypothetical protein  35.51 
 
 
135 aa  74.3  0.000000000003  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_007498  Pcar_2318  hypothetical protein  28.04 
 
 
130 aa  55.1  0.000002  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00000000000668387  n/a   
 
 
-
 
NC_009483  Gura_1796  hypothetical protein  26.8 
 
 
137 aa  50.1  0.00005  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.00914712  n/a   
 
 
-
 
NC_002939  GSU2048  hypothetical protein  27.03 
 
 
133 aa  48.9  0.0001  Geobacter sulfurreducens PCA  Bacteria  unclonable  0.0000179688  n/a   
 
 
-
 
NC_007517  Gmet_0953  hypothetical protein  23.85 
 
 
114 aa  47.8  0.0003  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_3456  hypothetical protein  35.09 
 
 
154 aa  42.7  0.009  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  hitchhiker  0.00072555 
 
 
-
 
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