12 homologs were found in PanDaTox collection
for query gene Swoo_1185 on replicon NC_010506
Organism: Shewanella woodyi ATCC 51908



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010506  Swoo_1185  hypothetical protein  100 
 
 
162 aa  344  4e-94  Shewanella woodyi ATCC 51908  Bacteria  normal  decreased coverage  0.000000464708 
 
 
-
 
NC_008321  Shewmr4_1913  hypothetical protein  56.29 
 
 
156 aa  194  5.000000000000001e-49  Shewanella sp. MR-4  Bacteria  normal  0.0782152  hitchhiker  0.0000000648872 
 
 
-
 
NC_008345  Sfri_3618  hypothetical protein  57.72 
 
 
152 aa  194  5.000000000000001e-49  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_2065  hypothetical protein  55.63 
 
 
156 aa  191  3e-48  Shewanella sp. MR-7  Bacteria  normal  0.161924  unclonable  0.0000322681 
 
 
-
 
NC_008577  Shewana3_1966  hypothetical protein  55.7 
 
 
151 aa  190  7e-48  Shewanella sp. ANA-3  Bacteria  normal  0.68886  hitchhiker  0.000852283 
 
 
-
 
NC_007954  Sden_2845  hypothetical protein  56.72 
 
 
188 aa  173  9.999999999999999e-43  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_2530  hypothetical protein  54.76 
 
 
192 aa  157  7e-38  Shewanella baltica OS195  Bacteria  normal  0.679175  normal  0.373943 
 
 
-
 
NC_011663  Sbal223_1936  hypothetical protein  53.17 
 
 
211 aa  154  6e-37  Shewanella baltica OS223  Bacteria  normal  0.103479  normal  0.782669 
 
 
-
 
NC_013132  Cpin_6175  hypothetical protein  29.19 
 
 
252 aa  68.9  0.00000000003  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.0570392 
 
 
-
 
NC_011071  Smal_0386  hypothetical protein  30.94 
 
 
159 aa  67  0.00000000009  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_009441  Fjoh_0498  beta-lactamase  30.3 
 
 
502 aa  63.9  0.0000000009  Flavobacterium johnsoniae UW101  Bacteria  normal  0.472446  n/a   
 
 
-
 
NC_009441  Fjoh_0499  hypothetical protein  28.48 
 
 
158 aa  59.7  0.00000002  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>