Gene Cpin_6175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6175 
Symbol 
ID8362357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7794241 
End bp7794999 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content44% 
IMG OID644968305 
Producthypothetical protein 
Protein accessionYP_003125784 
Protein GI256425131 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0570392 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACAA TTCTCACGTT TTTGCTTTTA CTCTGTTGTA ATATGCTATC GGCCCAACAG 
ACGGATGCCG AATTATCTGT GCTGATCATC CGGCAGGATA GCCTGTTCTG GGATGCGTAC
AATCGTTGCG ATACCAGCGC TATGGGCTCA TTTTTTACTG CGGATGTAGA ATTTTATCAT
GATAAGGGAG GACCGACTAT CGGGTTGCCT GCGCTTGTCA GATCATTCAG TAAGAATCTG
TGTAGTAACC GTAACTGGCA TCTTAAAAGA GAGCCGGTAC CCGGCTCTTA TAAAGTATTT
CCGCTGAGGA AAGATAACGC GATTTATGGG GCCGTATTAA CCGGTGAACA TGTGTTTTAT
ATTCTGGAAT CAGGAAAAGG GCCGCAACTG GATGGACATG CCTCCTTTAC GCATCTCTGG
TTAAAAGGAG ATGGCCTATG GAAGATGAAG AATTTATTGA GTTATGATCA TGGTCCTGCT
ACTTATCAGA ATAAACGGAA AGAAATTGTA TTGCCTGAAA AGGTATTGTC GGCATATGTG
GGAACGTACC AGGGACCGAA TGTAGGTATG TTACAGATTA CAATAGAGAA AGGTGCATTG
GTGATGACGA TTAAAGACAA GGTATATCGG CTGTATGCGG AGAAAGAGGA TGTTTTCTTT
GATAAAGACC GTGACCTGGT GTTTGAGTTT GAGAAGGAAC GGAAGTTGAC GGTGAAGGAA
AACGGTGTGG TGGCGGAGGT GTTGCCGAAG ATAAAATAA
 
Protein sequence
MKTILTFLLL LCCNMLSAQQ TDAELSVLII RQDSLFWDAY NRCDTSAMGS FFTADVEFYH 
DKGGPTIGLP ALVRSFSKNL CSNRNWHLKR EPVPGSYKVF PLRKDNAIYG AVLTGEHVFY
ILESGKGPQL DGHASFTHLW LKGDGLWKMK NLLSYDHGPA TYQNKRKEIV LPEKVLSAYV
GTYQGPNVGM LQITIEKGAL VMTIKDKVYR LYAEKEDVFF DKDRDLVFEF EKERKLTVKE
NGVVAEVLPK IK