7 homologs were found in PanDaTox collection
for query gene Swit_0543 on replicon NC_009511
Organism: Sphingomonas wittichii RW1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009511  Swit_0543  hypothetical protein  100 
 
 
234 aa  469  1.0000000000000001e-131  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_008048  Sala_0325  type II secretion system protein N  27.27 
 
 
238 aa  61.6  0.000000009  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_009457  VC0395_A2296  general secretion pathway protein N  24.79 
 
 
252 aa  53.1  0.000004  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_007794  Saro_2647  type II secretion system protein N  27.37 
 
 
244 aa  45.1  0.001  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_0176  general secretion pathway protein N  24.28 
 
 
253 aa  42  0.007  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008322  Shewmr7_0161  type II secretion system protein N  24.69 
 
 
253 aa  42  0.008  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_0161  type II secretion system protein N  24.69 
 
 
253 aa  42  0.008  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
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