Gene Sala_0325 details

Gene Information

• Locus tag: Sala_0325
• ID: 4082356
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sphingopyxis alaskensis RB2256
• Kingdom: Bacteria
• Replicon accession: NC_008048
• Strand: +
• Start bp: 331593
• End bp: 332309
• Gene Length: 717 bp
• Protein Length: 238 aa
• Translation table: 11
• GC content: 74%
• IMG OID: 638008684
• Product: type II secretion system protein N
• Protein accession: YP_615381
• Protein GI: 103485820

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 15
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAGCGTGC GGCGGCGCTG GATCGTTGCG GCGGCGCTGC TGGCGCTCGT CCTGCTTGTC 
GCGACCTTTC CGATGCGCCT CGCGCTCGGC TGGTCGGGGG CGGGCGACGC GGGGGTGTCG 
GCGCGGACGG TGCGCGGATC GGTCTGGTCG GCCGAACTGG TCGATGCGCG GCTCGGCGCG 
CTGCCGCTCG GCACGGTGCG CGCCAGCCTG TCGCCGCTGG CGCTGCTCAC CGGCGCGACC 
GAACTGGCTT TCGAGCGCAG CGACGACCGG CTCGGCGCGC TCGCGGGACG GCTGCACGGC 
ACCAGTCCGC GCGGCATGTC CGACGTCAAT GGGATGAGCG CGATGGTCGG CGGGCTGGGC 
ATGATCCCGG TCGATACGAT CCGCTTCGAG GGCGCGACGG TGCGCTTCGA CGATGCGGGC 
AAATGCGTGC GCGCGAGCGG CCGGGTGCAG CTGATGGTCG CCGCGCCGAT CGCGGGGCTC 
GACCTGTCGC GCGGGCTCTC CGGCCCGCTC CGCTGCGCGA ACGGGCGCGC CGAAGCGGCG 
CTCGCCAGCC AGTCGGGGAT GGAGCGGTTG ACGCTGATCT TCGATGGCGG CGGGGCCTGG 
CGCGCACGCC TTGCCATCAG CGTCGACCGC GATCCGACAA TGGCGGCGGC GCTCGCGGCG 
CTGGGCTTCC GCGCTGCGCC GGGCGGGTTC GTGCTGGCGA CTTCGGGTCG CTTCTGA 

 

Protein sequence

MSVRRRWIVA AALLALVLLV ATFPMRLALG WSGAGDAGVS ARTVRGSVWS AELVDARLGA 
LPLGTVRASL SPLALLTGAT ELAFERSDDR LGALAGRLHG TSPRGMSDVN GMSAMVGGLG 
MIPVDTIRFE GATVRFDDAG KCVRASGRVQ LMVAAPIAGL DLSRGLSGPL RCANGRAEAA 
LASQSGMERL TLIFDGGGAW RARLAISVDR DPTMAAALAA LGFRAAPGGF VLATSGRF