12 homologs were found in PanDaTox collection
for query gene Svir_03580 on replicon NC_013159
Organism: Saccharomonospora viridis DSM 43017



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013159  Svir_03580  hypothetical protein  100 
 
 
327 aa  624  1e-178  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.393367  normal 
 
 
-
 
NC_013521  Sked_24460  hypothetical protein  32.19 
 
 
339 aa  91.3  2e-17  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.760342 
 
 
-
 
NC_013739  Cwoe_1210  hypothetical protein  30.5 
 
 
321 aa  79  0.0000000000001  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.0200595 
 
 
-
 
NC_013530  Xcel_1109  hypothetical protein  30.69 
 
 
333 aa  70.1  0.00000000005  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.334333  n/a   
 
 
-
 
NC_013441  Gbro_3222  hypothetical protein  29.51 
 
 
333 aa  66.2  0.0000000007  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0108  hypothetical protein  30.33 
 
 
337 aa  65.1  0.000000002  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_2648  hypothetical protein  32.72 
 
 
339 aa  65.1  0.000000002  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0608226  normal 
 
 
-
 
NC_013757  Gobs_1107  hypothetical protein  29.06 
 
 
315 aa  51.6  0.00002  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.497392  n/a   
 
 
-
 
NC_014151  Cfla_1387  hypothetical protein  28.77 
 
 
331 aa  49.7  0.00007  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal  0.18034 
 
 
-
 
NC_012028  Hlac_2757  hypothetical protein  27.68 
 
 
154 aa  48.9  0.0001  Halorubrum lacusprofundi ATCC 49239  Archaea  n/a    n/a   
 
 
-
 
NC_009921  Franean1_4640  hypothetical protein  32.26 
 
 
168 aa  43.9  0.004  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_1273  hypothetical protein  33.68 
 
 
334 aa  43.5  0.005  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
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