11 homologs were found in PanDaTox collection
for query gene Smed_5646 on replicon NC_009621
Organism: Sinorhizobium medicae WSM419



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009621  Smed_5646  hypothetical protein  100 
 
 
102 aa  209  1e-53  Sinorhizobium medicae WSM419  Bacteria  normal  0.22473  normal  0.357497 
 
 
-
 
NC_013441  Gbro_2145  hypothetical protein  43.82 
 
 
203 aa  70.5  0.000000000007  Gordonia bronchialis DSM 43247  Bacteria  normal  0.949876  n/a   
 
 
-
 
NC_014151  Cfla_3584  ATP-binding membrane protein  43.37 
 
 
200 aa  67.4  0.00000000006  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_0695  antibiotic resistance protein  41.03 
 
 
211 aa  66.6  0.0000000001  Frankia sp. EAN1pec  Bacteria  normal  normal  0.171205 
 
 
-
 
NC_007777  Francci3_1853  putative TmrB-like protein  50 
 
 
211 aa  65.1  0.0000000003  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_0506  ATP-binding membrane protein  38.1 
 
 
200 aa  65.1  0.0000000003  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.971484  n/a   
 
 
-
 
NC_014151  Cfla_0416  TmrB  39.51 
 
 
175 aa  64.3  0.0000000005  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_4294  hypothetical protein  41.03 
 
 
174 aa  63.2  0.000000001  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_4782  hypothetical protein  32.14 
 
 
173 aa  52.4  0.000002  Streptosporangium roseum DSM 43021  Bacteria  normal  0.979447  normal  0.143006 
 
 
-
 
NC_013131  Caci_5569  ATP/GTP binding protein  28.57 
 
 
174 aa  48.5  0.00003  Catenulispora acidiphila DSM 44928  Bacteria  decreased coverage  0.004333  normal 
 
 
-
 
NC_014158  Tpau_1509  hypothetical protein  45.83 
 
 
97 aa  47  0.00009  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
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