| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1853 |
|---|
| Symbol | |
|---|
| ID | 3906128 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | + |
|---|
| Start bp | 2186394 |
|---|
| End bp | 2187029 |
|---|
| Gene Length | 636 bp |
|---|
| Protein Length | 211 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637879191 |
|---|
| Product | putative TmrB-like protein |
|---|
| Protein accession | YP_480958 |
|---|
| Protein GI | 86740558 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGGTCT GCCCGTGCCT GACTATTCTT CGGCTGGTGC CGACCCTCAT CTGGATCAAC
GGTCCGAACG CCGTCGGGAA GACCCAGGTC GCCCACAACC TGCACCGCAG ACTGCCCGGA
AGCTTCATCA GTGACCCCGA GCACCTCGGC TTCGCGATGC GCCGGATGCT CCCGAAGCCC
CGGCGCATGG ACTTCCGCGA CGTCCCCCTG TGGCGCCAGG CGGTCAGCGA AATGCTCCAC
CTTGCTCTCC AAGGGCCCGA GGACCCGGTG ATCGCGCCGA TGACCATCCT CGACCCCGGC
CTGCTCGGCG AGCTGACGGC CTCGGCCCGC GCCGCCGGGC ACCGCGTCGA GCACGTCACG
CTGCTTGCCG ACCGCACGAC GATGATCCGC CGCATCCACC GACGCGGTGA GACGTCCCGC
AGTTTCAGCG CCCGCCAGCT CGACCGTGCC CTCGACGTCC TGCGGGCTCC CGAGTTCGCT
CGTCATCTCC CCACCGACAC CCTGTCGATC TCCGCCGTGG CGGATGACGT CGCAAGCCAC
ACGGGGTTCA CGCTCAGCCC TGACACATCA GGGCGACTCG TGCGACAGGG ACGCCAACTC
GCCGTCCAGC TCCGCCACAT CCGCCTTAAC GCTTGA
|
|---|
| Protein sequence | MLVCPCLTIL RLVPTLIWIN GPNAVGKTQV AHNLHRRLPG SFISDPEHLG FAMRRMLPKP
RRMDFRDVPL WRQAVSEMLH LALQGPEDPV IAPMTILDPG LLGELTASAR AAGHRVEHVT
LLADRTTMIR RIHRRGETSR SFSARQLDRA LDVLRAPEFA RHLPTDTLSI SAVADDVASH
TGFTLSPDTS GRLVRQGRQL AVQLRHIRLN A
|
|---|
| |