9 homologs were found in PanDaTox collection
for query gene Sked_12850 on replicon NC_013521
Organism: Sanguibacter keddieii DSM 10542



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013521  Sked_12850  hypothetical protein  100 
 
 
188 aa  364  1e-100  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.822848 
 
 
-
 
NC_013510  Tcur_2204  hypothetical protein  50.53 
 
 
171 aa  140  9.999999999999999e-33  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00000962337  n/a   
 
 
-
 
NC_014210  Ndas_1135  hypothetical protein  43.18 
 
 
174 aa  111  7.000000000000001e-24  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.22269  normal 
 
 
-
 
NC_014158  Tpau_3628  transcriptional regulator, ArsR family  37.4 
 
 
154 aa  75.5  0.0000000000004  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_8892  hypothetical protein  32.49 
 
 
197 aa  62  0.000000004  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_3838  ArsR family transcriptional regulator  28.42 
 
 
175 aa  62  0.000000005  Herpetosiphon aurantiacus ATCC 23779  Bacteria  unclonable  0.000000189595  n/a   
 
 
-
 
NC_008254  Meso_0974  ArsR family transcriptional regulator  46.97 
 
 
116 aa  43.1  0.003  Chelativorans sp. BNC1  Bacteria  normal  0.0630999  n/a   
 
 
-
 
NC_009338  Mflv_1660  protein tyrosine phosphatase  36.9 
 
 
225 aa  42.4  0.004  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.0913425  normal 
 
 
-
 
NC_014158  Tpau_0317  regulatory protein ArsR  23.68 
 
 
143 aa  41.6  0.007  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.0492481  n/a   
 
 
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