6 homologs were found in PanDaTox collection
for query gene Shewmr7_1394 on replicon NC_008322
Organism: Shewanella sp. MR-7



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008322  Shewmr7_1394  O-antigen polymerase  100 
 
 
399 aa  787    Shewanella sp. MR-7  Bacteria  normal  normal  0.0739482 
 
 
-
 
NC_007517  Gmet_2009  O-antigen polymerase  25.57 
 
 
459 aa  53.9  0.000005  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_011661  Dtur_0583  O-antigen polymerase  31.68 
 
 
449 aa  49.7  0.00009  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2212  O-antigen polymerase  25.84 
 
 
415 aa  45.8  0.001  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0880149  n/a   
 
 
-
 
NC_007510  Bcep18194_A5652  O-antigen polymerase  24 
 
 
426 aa  45.1  0.002  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_0364  O-antigen polymerase  25.65 
 
 
428 aa  45.1  0.002  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
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