Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1394 |
Symbol | |
ID | 4258563 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 1612254 |
End bp | 1613453 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 638122028 |
Product | O-antigen polymerase |
Protein accession | YP_737450 |
Protein GI | 114046900 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0739482 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAGTATT CAAATGTTTT TTTTGCTGTT GGTTTTTTTA TCTCAATATC CTCGCTGCCT ACACTTTTCT TTTTAATCCC CGGCGGGGCT TTAAATGTAT TATCTTGTAT AATTGCTTTG CCAATATTGT TACTCTTACT TATTTTAAAT GGTGGGTATA AGTTTCCCTG TGATAACTTA TTAATTGTTG CGCAGGTATG TTTGATTTTT ATTTATTTTT TAGGTGTGTC GGTTTCTTTG GTTTCAAATG ATTTTTTTGA GCTATTTGCT TCAGCTATTA GGTATTTTTC ATACTTCATT TTTTTTATTG TTGCGTATAA TTTGTCTTTG TCAGGTCATT TGACGATTAA AAAGTTTGAT AAATTTATCG TGTTTTTGGT CATGGTTTTG CTATTTTTCT CTGTATACCA AATTTTGTCA GGAACTCGGC CTTTTATGAA TGGTGCTTAC CGTTTATCTA GTATCTTTGG TCCAACCCCC GCCGGATTTG CACTTGTTTT GCTTTTTTGT TCAATATATT TATGGCATCG AAGAAATGTT GCTAGATATT ATGAGTTTTT GTTTATTTCT TCCGTTGCAA TGGTTTTATT GGTTCATTCA AGGCAAGCAA TAGTAACCGT ATTTATTTCT ATATTCTTGA TTTTATTTCT TAAGTCAAAG CTACACAAGA AAATAGCTTA TTTACTTATA TTCTCTTTGT TTGTTTTATT ATTTTATTGG GTTGTTTTAA ATACTGATTT TTTACCTAGA TTTACCGATA TGCTGACAAG GGACGGTGTT GATGGCTCGA CTTTAACTCG AATTAGAATA TTCGAAACTG TAGTCAATAG TTTAGATTAT TATGAAAAAG TATTTGGTGT CGGGCTAGGC GGGTTTAATC ATTTTTATGG AGATATAACA GGGAAGTTAG GGGTCGCAGC TCATAATGAT TTTTTGCTAT TCTATATCGA AACTGGTGCA GTAGGATTAA TTTTGTATGT AATTTATTTG TTTACATTAT TGTTGTTTTC CTTCAGGAGA TCTAATGAAA ATACTGATCG TGATTTCAAG AGCGTTATGT TTGTTTTATA TGTATCTTTT CCTGTGATGT CTTTTATTAA TAATCCTTAT TACTATCCGC AGGTTCAATG GTTAATATTA ACTTTTATTG GAATTTTATT AGGACATGAA AAACGTCTTA GATGCAAAGC TAATGCTTAA
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Protein sequence | MKYSNVFFAV GFFISISSLP TLFFLIPGGA LNVLSCIIAL PILLLLLILN GGYKFPCDNL LIVAQVCLIF IYFLGVSVSL VSNDFFELFA SAIRYFSYFI FFIVAYNLSL SGHLTIKKFD KFIVFLVMVL LFFSVYQILS GTRPFMNGAY RLSSIFGPTP AGFALVLLFC SIYLWHRRNV ARYYEFLFIS SVAMVLLVHS RQAIVTVFIS IFLILFLKSK LHKKIAYLLI FSLFVLLFYW VVLNTDFLPR FTDMLTRDGV DGSTLTRIRI FETVVNSLDY YEKVFGVGLG GFNHFYGDIT GKLGVAAHND FLLFYIETGA VGLILYVIYL FTLLLFSFRR SNENTDRDFK SVMFVLYVSF PVMSFINNPY YYPQVQWLIL TFIGILLGHE KRLRCKANA
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