Gene Shewmr7_1394 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1394 
Symbol 
ID4258563 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1612254 
End bp1613453 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content31% 
IMG OID638122028 
ProductO-antigen polymerase 
Protein accessionYP_737450 
Protein GI114046900 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0739482 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGTATT CAAATGTTTT TTTTGCTGTT GGTTTTTTTA TCTCAATATC CTCGCTGCCT 
ACACTTTTCT TTTTAATCCC CGGCGGGGCT TTAAATGTAT TATCTTGTAT AATTGCTTTG
CCAATATTGT TACTCTTACT TATTTTAAAT GGTGGGTATA AGTTTCCCTG TGATAACTTA
TTAATTGTTG CGCAGGTATG TTTGATTTTT ATTTATTTTT TAGGTGTGTC GGTTTCTTTG
GTTTCAAATG ATTTTTTTGA GCTATTTGCT TCAGCTATTA GGTATTTTTC ATACTTCATT
TTTTTTATTG TTGCGTATAA TTTGTCTTTG TCAGGTCATT TGACGATTAA AAAGTTTGAT
AAATTTATCG TGTTTTTGGT CATGGTTTTG CTATTTTTCT CTGTATACCA AATTTTGTCA
GGAACTCGGC CTTTTATGAA TGGTGCTTAC CGTTTATCTA GTATCTTTGG TCCAACCCCC
GCCGGATTTG CACTTGTTTT GCTTTTTTGT TCAATATATT TATGGCATCG AAGAAATGTT
GCTAGATATT ATGAGTTTTT GTTTATTTCT TCCGTTGCAA TGGTTTTATT GGTTCATTCA
AGGCAAGCAA TAGTAACCGT ATTTATTTCT ATATTCTTGA TTTTATTTCT TAAGTCAAAG
CTACACAAGA AAATAGCTTA TTTACTTATA TTCTCTTTGT TTGTTTTATT ATTTTATTGG
GTTGTTTTAA ATACTGATTT TTTACCTAGA TTTACCGATA TGCTGACAAG GGACGGTGTT
GATGGCTCGA CTTTAACTCG AATTAGAATA TTCGAAACTG TAGTCAATAG TTTAGATTAT
TATGAAAAAG TATTTGGTGT CGGGCTAGGC GGGTTTAATC ATTTTTATGG AGATATAACA
GGGAAGTTAG GGGTCGCAGC TCATAATGAT TTTTTGCTAT TCTATATCGA AACTGGTGCA
GTAGGATTAA TTTTGTATGT AATTTATTTG TTTACATTAT TGTTGTTTTC CTTCAGGAGA
TCTAATGAAA ATACTGATCG TGATTTCAAG AGCGTTATGT TTGTTTTATA TGTATCTTTT
CCTGTGATGT CTTTTATTAA TAATCCTTAT TACTATCCGC AGGTTCAATG GTTAATATTA
ACTTTTATTG GAATTTTATT AGGACATGAA AAACGTCTTA GATGCAAAGC TAATGCTTAA
 
Protein sequence
MKYSNVFFAV GFFISISSLP TLFFLIPGGA LNVLSCIIAL PILLLLLILN GGYKFPCDNL 
LIVAQVCLIF IYFLGVSVSL VSNDFFELFA SAIRYFSYFI FFIVAYNLSL SGHLTIKKFD
KFIVFLVMVL LFFSVYQILS GTRPFMNGAY RLSSIFGPTP AGFALVLLFC SIYLWHRRNV
ARYYEFLFIS SVAMVLLVHS RQAIVTVFIS IFLILFLKSK LHKKIAYLLI FSLFVLLFYW
VVLNTDFLPR FTDMLTRDGV DGSTLTRIRI FETVVNSLDY YEKVFGVGLG GFNHFYGDIT
GKLGVAAHND FLLFYIETGA VGLILYVIYL FTLLLFSFRR SNENTDRDFK SVMFVLYVSF
PVMSFINNPY YYPQVQWLIL TFIGILLGHE KRLRCKANA