10 homologs were found in PanDaTox collection
for query gene Sde_3270 on replicon NC_007912
Organism: Saccharophagus degradans 2-40



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007912  Sde_3270  CBS  100 
 
 
200 aa  399  9.999999999999999e-111  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.0245194 
 
 
-
 
NC_010506  Swoo_2638  CBS domain-containing protein  54.12 
 
 
201 aa  210  9e-54  Shewanella woodyi ATCC 51908  Bacteria  normal  0.0564346  normal  0.0743126 
 
 
-
 
NC_007954  Sden_2084  hypothetical protein  53.77 
 
 
201 aa  205  3e-52  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_2734  CBS domain-containing protein  53.37 
 
 
202 aa  204  5e-52  Shewanella baltica OS195  Bacteria  normal  0.55077  normal  0.387641 
 
 
-
 
NC_008573  Shewana3_4177  CBS domain-containing protein  51.58 
 
 
224 aa  204  8e-52  Shewanella sp. ANA-3  Bacteria  normal  0.0451458  normal  0.0529538 
 
 
-
 
NC_009512  Pput_3103  hypothetical protein  39.79 
 
 
216 aa  136  2e-31  Pseudomonas putida F1  Bacteria  normal  0.572416  normal 
 
 
-
 
NC_010322  PputGB1_2312  hypothetical protein  40.21 
 
 
216 aa  135  4e-31  Pseudomonas putida GB-1  Bacteria  normal  0.728668  normal 
 
 
-
 
NC_010501  PputW619_2819  hypothetical protein  37.57 
 
 
216 aa  126  2.0000000000000002e-28  Pseudomonas putida W619  Bacteria  normal  0.0457027  normal 
 
 
-
 
NC_007954  Sden_2114  hypothetical protein  48.98 
 
 
88 aa  50.1  0.00002  Shewanella denitrificans OS217  Bacteria  hitchhiker  0.00228515  n/a   
 
 
-
 
NC_008541  Arth_0964  hypothetical protein  26.63 
 
 
226 aa  49.3  0.00004  Arthrobacter sp. FB24  Bacteria  normal  0.871923  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>